G139839


Basic Information

Item Value
gene id G139839
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 2733645 ~ 2734317 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU158914
GTTCAGTTTAATTTCATATTTTAGTTTAAGTAATTTTAAGTTTTAGTTTTTTGATTTTAGTTTAAGTAATTTTTAGTTTTAGTAATTTTATGTGCTTTTGTAATTTTTATTATTATTTTTTTTTAAATATTTTTTATTAAGCTTTATTTTTATTTCAGCTTTAGCTTTAGTAATTTTAGTACTTCAACTGAAACCTATTTTATTTCAGTTAGTTGACAAGGCAACATTTCTCATTTTTGCTTAATTTTTCAAGTTTTTCATGTAATATACAGTCAAACCCAAAATGTATTCAGACACCTTGAACATTTCATTCATTAATACAGTTTATTCACTATAGTTTAAAAAATGGTAATAAAATATGACAAGATCTCAGAGTTAAACTGTGTCAGAAAAAAAATCATCTTAATTATGTCAGATAACACTTAAGCAAAACATGGTCAGGTCAAAGTCTGAATAATTTTTGGTTCCAAATTTTTATCAATTTTACTGGTAGTCCACTGTATGAAGAATTTTTGGGTATAATATGTCACAGTTTACTTTATTTTGCTATCCTCACTTACATAAATGAACTATAGTGTCCTGCACCCACTAGTAAAAATATATCAAAAATGTCTGAATAATTTTTGGTTTGACTGTATATATATATATATATATATATTCAGCTTCATTTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU158914 True 673 lncRNA 0.24 1 2733645 2734317

Neighbor

gene id symbol gene type direction distance location
CI01000027_02460101_02470648 DPYS coding downstream 262840 2459265 ~ 2470805 (-)
CI01000027_02314898_02317288 NA coding downstream 416337 2314551 ~ 2317308 (-)
CI01000027_02240021_02241453 NA coding downstream 492192 2239996 ~ 2241453 (-)
CI01000027_02226447_02227499 NA coding downstream 506146 2225781 ~ 2227499 (-)
CI01000027_02147653_02152768 NA coding downstream 580159 2147557 ~ 2153486 (-)
CI01000027_02742168_02773304 NA coding upstream 7851 2742168 ~ 2773304 (-)
CI01000027_02840202_02843749 NA coding upstream 105165 2839482 ~ 2845691 (-)
CI01000027_02950348_02954214 SQLE, SQLEA coding upstream 215789 2950106 ~ 2954214 (-)
CI01000027_02961909_02972343 RNF144B coding upstream 227447 2961764 ~ 2972343 (-)
CI01000027_02984235_02987159 CCDC127, CCDC127A coding upstream 249690 2984007 ~ 2987159 (-)
G139807 NA non-coding downstream 38208 2695226 ~ 2695437 (-)
G139806 NA non-coding downstream 38459 2694912 ~ 2695186 (-)
G139805 NA non-coding downstream 39221 2694215 ~ 2694424 (-)
G139798 NA non-coding downstream 50953 2682270 ~ 2682692 (-)
G139797 NA non-coding downstream 51613 2681747 ~ 2682032 (-)
G139743 NA non-coding upstream 3031 2737348 ~ 2738071 (-)
G139845 NA non-coding upstream 54032 2788349 ~ 2855600 (-)
G139929 NA non-coding upstream 194991 2929308 ~ 2929766 (-)
G139883 NA non-coding upstream 213014 2947331 ~ 2947916 (-)
G139939 NA non-coding upstream 377951 3112268 ~ 3114186 (-)
CI01000027_02119227_02124423 NA other downstream 607617 2119131 ~ 2125142 (-)
CI01000027_01303308_01319462 NR2F5, NR2F1, NR2F1.L, NR2F2 other downstream 1413484 1302034 ~ 1321178 (-)
CI01000027_01241417_01245177 NA other downstream 1486668 1240478 ~ 1246267 (-)
G139117 NA other downstream 2496066 234212 ~ 237579 (-)
G140118 NA other upstream 767217 3509352 ~ 3584679 (-)
CI01000027_03787377_03788902 NA other upstream 1053061 3787377 ~ 3790279 (-)
CI01000027_03922380_03931033 NA other upstream 1188079 3922242 ~ 3931033 (-)
G141481 NA other upstream 1637930 4372247 ~ 4412810 (-)
G141488 NA other upstream 1773158 4507475 ~ 4508971 (-)

Expression


Co-expression Network