G138830


Basic Information

Item Value
gene id G138830
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 3122291 ~ 3122705 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU157736
CTTTCTTTTCTGACCCGTCTCCCTAGTTTTTCATTCTTTCCCCCTCTCCATCGATCAAATCCTCTCCCCGCTTACATGCTGCAATAATCTATTAACTTATTTGCGTCTGTCTCCATAGCAACCCTGCTCTGGTCTAGCTTCTGACGTCTCCTAAAGCAGACAGCTCTCCAAGGCTCATTTGAACCGTGAACTCCAGCTGTCTGACAGAATGAGAGGAGAAACTAATCGGATGGCTCAGGAGGCAGGAAACATTCAGAGATTATCCGTACTGACCCTCTGCAGCCATGGAAAATGCTAAAGATTAACCGTTCTTCTGCTACAGCACCTTGTGCAACCAAAATAAATGAACAGCATAATAACTGCATGATAAATGAGACCAAACTGCAAAGATCTCTTCACAGGGAGACAAACTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157736 True 415 lncRNA 0.45 1 3122291 3122705

Neighbor

gene id symbol gene type direction distance location
CI01000027_03110196_03113083 NA coding upstream 8882 3109207 ~ 3113409 (+)
CI01000027_03014464_03027710 E430025E21RIK, STRUMPELLIN, KIAA0196 coding upstream 94429 3013856 ~ 3027862 (+)
CI01000027_03008262_03011156 NA coding upstream 110296 3008262 ~ 3011995 (+)
CI01000027_02995394_03005981 ATAD2 coding upstream 116294 2995394 ~ 3005997 (+)
CI01000027_02991231_02994560 PSMA2 coding upstream 127574 2991231 ~ 2994717 (+)
CI01000027_03142352_03156415 NA coding downstream 19405 3142110 ~ 3157077 (+)
CI01000027_03159177_03163102 NA coding downstream 36264 3158969 ~ 3163325 (+)
CI01000027_03174793_03181990 NA coding downstream 52088 3174793 ~ 3182308 (+)
CI01000027_03202787_03208051 MTX1A coding downstream 80082 3202787 ~ 3208301 (+)
CI01000027_03212432_03231800 THBS3, THBS3A coding downstream 89727 3212432 ~ 3231862 (+)
G138828 NA non-coding upstream 5632 3116370 ~ 3116659 (+)
G138817 NA non-coding upstream 133358 2988688 ~ 2988933 (+)
G138802 NA non-coding upstream 151483 2963817 ~ 2970808 (+)
CI01000027_02941870_02946290 OXR1 non-coding upstream 173514 2941870 ~ 2948777 (+)
G138775 NA non-coding upstream 388996 2732818 ~ 2733295 (+)
G138831 NA non-coding downstream 169 3122874 ~ 3123166 (+)
G138832 NA non-coding downstream 2092 3124797 ~ 3125029 (+)
G138833 NA non-coding downstream 2744 3125449 ~ 3125675 (+)
G138834 NA non-coding downstream 4338 3127043 ~ 3127275 (+)
G138835 NA non-coding downstream 4650 3127355 ~ 3127942 (+)
G138515 NA other upstream 1445431 1664408 ~ 1676860 (+)
G138436 NA other upstream 1614475 1506961 ~ 1507816 (+)
G138290 NA other upstream 2123110 995970 ~ 999181 (+)
G138247 NA other upstream 2252716 855388 ~ 893121 (+)
G138238 NA other upstream 2290608 829774 ~ 831683 (+)
G138915 NA other downstream 361682 3484387 ~ 3486647 (+)
G138953 NA other downstream 379367 3502072 ~ 3520065 (+)
G140436 NA other downstream 1614693 4737398 ~ 4774262 (+)
G140440 NA other downstream 1657712 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 1926218 5050310 ~ 5055755 (+)

Expression


Co-expression Network