G138833


Basic Information

Item Value
gene id G138833
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 3125449 ~ 3125675 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU157739
CCAGGATGTCTCTTTTATCTAACACACCTGACTGAACTCATCAGCTCATCAGTACATGACCTGATTTAAGGGTGTCAGACTAGATACTTAAAATTAGGAGCACTGAGAATCACTGATCTAGAAACAGCACCCAGTTTAACAGCTCACAGGTTAACAGCTTAACATCTATCAGCTCACAGGATATGGAAAACTAGCTTACTGCTTACATATGGAAAAGTATATATTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157739 True 227 lncRNA 0.39 1 3125449 3125675

Neighbor

gene id symbol gene type direction distance location
CI01000027_03110196_03113083 NA coding upstream 12040 3109207 ~ 3113409 (+)
CI01000027_03014464_03027710 E430025E21RIK, STRUMPELLIN, KIAA0196 coding upstream 97587 3013856 ~ 3027862 (+)
CI01000027_03008262_03011156 NA coding upstream 113454 3008262 ~ 3011995 (+)
CI01000027_02995394_03005981 ATAD2 coding upstream 119452 2995394 ~ 3005997 (+)
CI01000027_02991231_02994560 PSMA2 coding upstream 130732 2991231 ~ 2994717 (+)
CI01000027_03142352_03156415 NA coding downstream 16435 3142110 ~ 3157077 (+)
CI01000027_03159177_03163102 NA coding downstream 33294 3158969 ~ 3163325 (+)
CI01000027_03174793_03181990 NA coding downstream 49118 3174793 ~ 3182308 (+)
CI01000027_03202787_03208051 MTX1A coding downstream 77112 3202787 ~ 3208301 (+)
CI01000027_03212432_03231800 THBS3, THBS3A coding downstream 86757 3212432 ~ 3231862 (+)
G138832 NA non-coding upstream 420 3124797 ~ 3125029 (+)
G138831 NA non-coding upstream 2283 3122874 ~ 3123166 (+)
G138830 NA non-coding upstream 2744 3122291 ~ 3122705 (+)
G138828 NA non-coding upstream 8790 3116370 ~ 3116659 (+)
G138817 NA non-coding upstream 136516 2988688 ~ 2988933 (+)
G138834 NA non-coding downstream 1368 3127043 ~ 3127275 (+)
G138835 NA non-coding downstream 1680 3127355 ~ 3127942 (+)
G138836 NA non-coding downstream 3784 3129459 ~ 3136867 (+)
G138859 NA non-coding downstream 65945 3191620 ~ 3191938 (+)
G138888 NA non-coding downstream 122803 3248478 ~ 3248706 (+)
G138515 NA other upstream 1448589 1664408 ~ 1676860 (+)
G138436 NA other upstream 1617633 1506961 ~ 1507816 (+)
G138290 NA other upstream 2126268 995970 ~ 999181 (+)
G138247 NA other upstream 2255874 855388 ~ 893121 (+)
G138238 NA other upstream 2293766 829774 ~ 831683 (+)
G138915 NA other downstream 358712 3484387 ~ 3486647 (+)
G138953 NA other downstream 376397 3502072 ~ 3520065 (+)
G140436 NA other downstream 1611723 4737398 ~ 4774262 (+)
G140440 NA other downstream 1654742 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 1923248 5050310 ~ 5055755 (+)

Expression


Co-expression Network