G138926


Basic Information

Item Value
gene id G138926
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 3418423 ~ 3418690 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU157859
GTGCGGCGTATGGTTTGAGTACTGACAGGCTGACCCCCCACCCCTTCAACCTCTGCAGCAATGCTGGCAGCACTCATACATCTATTTCCCAAACACAACCTCTGGATATGACGCTGAGCACGTGCACTCAACTTCTTTGGTCGACCATGCCGAGGCCTGTTCTGAGTGGAACCTGTCCTGTTAAACCACTGTATGGTCTTGGCCACCGTGCTGCAGCTCAGTTTCAGGGTCTTGGCAATCTTCTTATAGCCTACGCCATCTTTATGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157859 True 268 lncRNA 0.52 1 3418423 3418690

Neighbor

gene id symbol gene type direction distance location
CI01000027_03335011_03357910 SLC4A7 coding upstream 60146 3335011 ~ 3358277 (+)
CI01000027_03278134_03279807 ANKRD34A coding upstream 137401 3278134 ~ 3281022 (+)
CI01000027_03243374_03247133 TXNIP, TXNIPB coding upstream 171253 3243154 ~ 3247170 (+)
CI01000027_03233523_03240000 HFE2 coding upstream 178421 3233523 ~ 3240002 (+)
CI01000027_03212432_03231800 THBS3, THBS3A coding upstream 186561 3212432 ~ 3231862 (+)
CI01000027_03421902_03436988 NA coding downstream 3138 3421828 ~ 3437216 (+)
CI01000027_03470743_03477848 TBX20 coding downstream 51930 3470620 ~ 3479641 (+)
CI01000027_03524553_03546701 SMARCC1, SMARCC1A coding downstream 104917 3523607 ~ 3546701 (+)
CI01000027_03570192_03600805 CSPG5A coding downstream 151502 3570192 ~ 3600805 (+)
CI01000027_03610825_03621755 PPOX coding downstream 192053 3610743 ~ 3621892 (+)
G138925 NA non-coding upstream 475 3417684 ~ 3417948 (+)
G138904 NA non-coding upstream 97892 3319283 ~ 3320531 (+)
G138884 NA non-coding upstream 103591 3309830 ~ 3314832 (+)
G138892 NA non-coding upstream 163216 3254930 ~ 3255207 (+)
G138888 NA non-coding upstream 169717 3248478 ~ 3248706 (+)
G138934 NA non-coding downstream 15157 3433847 ~ 3434057 (+)
G138959 NA non-coding downstream 29289 3447979 ~ 3503193 (+)
G138915 NA non-coding downstream 65697 3484387 ~ 3486647 (+)
G138918 NA non-coding downstream 73742 3492432 ~ 3497919 (+)
G138954 NA non-coding downstream 88832 3507522 ~ 3514673 (+)
G138515 NA other upstream 1741563 1664408 ~ 1676860 (+)
G138436 NA other upstream 1910607 1506961 ~ 1507816 (+)
G138290 NA other upstream 2419242 995970 ~ 999181 (+)
G138247 NA other upstream 2548848 855388 ~ 893121 (+)
G138238 NA other upstream 2586740 829774 ~ 831683 (+)
G138953 NA other downstream 83382 3502072 ~ 3520065 (+)
G140436 NA other downstream 1318708 4737398 ~ 4774262 (+)
G140440 NA other downstream 1361727 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 1630233 5050310 ~ 5055755 (+)

Expression


Co-expression Network