G140197


Basic Information

Item Value
gene id G140197
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 3670219 ~ 3671509 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU159337
TGGTGTAAAAAAACAAAACAAAAAAAGAAGAACTATAAATAACAGTGAGGGTGTTCCTCAAGCGGAAATATGAATGGTAGACATAAGATATGGAAAATGACAAAAATAGTAGCTACAATGTGTTTACAATGTGTTAACAAAATAAATGAGCAACAGTTACATTGTGCGTTCTGTTTGCTGGGTGTTAATGTCCAACTTTTAGTGATTGTGATACATATCTGTTATTCAAAGAAATCCAAAAATTATTTCCCATCATTAACACTTTGGCACATCTCACTAGAAATTGTCAGCCAATCTAGACATATGGTCAGCCAACAGCAGAGGCCGCTGTTTGAACAAAAAACAAAAAAAACAAAAAAAAAAATCGACATTTTACTTATTACAGATATTATTTTCTATACATGAGCTTATGTTTATAATTCCATACATAATGTGCAATTGTAAGTATATTCTATGCATATTCAATATTCCCTTTATAGAGAATGGAATGTCCTTCATTAAAGAAACAGAAAAACAAATATGTTTTTGACCAGCGGTTTTCCACAGAAAATGCTGTAGTGTAGCTATAAGCACCATCTGGGGCAATAAATCGCAATCTCTCTAAATACAATGGATTTGGAAATACTTATAAACCTCAAAAGCAATGATGCAAGCTCTTAAGCAAGCACAGCACAAAGCTGCAATTATTTACATCTTATTTAAATAAATTGCATTTAAGTCCAAGCTGAAAGAGGTTTTAAGTATTTTTGCGGCTAAAATTTAAAAACTTTGCCATGTGCAATTTTGTTCTATTCTTGAACACAGTTAATAACAGTACCAGTGTGGGGTCAATAACGAAATGTAGGTCTATAGATGTGTAACTATTCCTCAGTTTTTGTGGTGTTTATGTGGCTGTCTTTATTCATCTGCCACACAGGGGCAGCAAAAGACTGCAGATTGCATTAACTCATTCTTGCTCATATTCCATTCTGTTCACATCACCATTGCTAATAGTCTCTTCTGCTGCTTCTTCTTCTTCTTCCTTGTCCTCCTCCTCATGCATCTCCTCTGGGCTTAGGGGCTCTCCCAGGGTTGCTGGGGGTGAAATAGGGGGCAAAGGGATAGCTTCCCCTTTCTTTGCCAGTTCTGCTAGCTCCCGTGCGGAGCAGGAAGGGGTTGGAGAGGGATAGGGGTAAAGCGTTCCCCCCAAAGCACCTCTGAGTTCAGGTACGAGCTGCGGGCTTGACATGTCAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU159337 True 1233 lncRNA 0.38 2 3670219 3671509

Neighbor

gene id symbol gene type direction distance location
CI01000027_03513546_03521352 NA coding downstream 148867 3512392 ~ 3521352 (-)
CI01000027_03501726_03510058 NA coding downstream 160161 3501120 ~ 3510058 (-)
CI01000027_03492624_03493292 NA coding downstream 176927 3492500 ~ 3493292 (-)
CI01000027_03484797_03490716 HERPUD2 coding downstream 179266 3484742 ~ 3490953 (-)
CI01000027_03468269_03469904 NA coding downstream 200004 3467864 ~ 3470215 (-)
CI01000027_03689861_03690969 NA coding upstream 17930 3689439 ~ 3691211 (-)
CI01000027_03694455_03710634 NA coding upstream 22718 3694227 ~ 3711039 (-)
CI01000027_03750919_03761043 FLI1, FLI1B coding upstream 79321 3750830 ~ 3761063 (-)
CI01000027_03787377_03788902 NA coding upstream 115868 3787377 ~ 3790279 (-)
CI01000027_03832200_03836030 NA coding upstream 159696 3831205 ~ 3836530 (-)
G140183 NA non-coding downstream 26994 3642946 ~ 3643225 (-)
G140176 NA non-coding downstream 47572 3622422 ~ 3622647 (-)
G140134 NA non-coding downstream 78779 3586433 ~ 3591440 (-)
G140125 NA non-coding downstream 130123 3539489 ~ 3540096 (-)
G140124 NA non-coding downstream 131674 3538249 ~ 3538545 (-)
G140199 NA non-coding upstream 432 3671941 ~ 3672243 (-)
G140200 NA non-coding upstream 19961 3691470 ~ 3691687 (-)
G140201 NA non-coding upstream 20583 3692092 ~ 3692459 (-)
G140202 NA non-coding upstream 21365 3692874 ~ 3693219 (-)
G140118 NA other downstream 85540 3509352 ~ 3584679 (-)
CI01000027_02226447_02227499 NA other downstream 1442194 2225781 ~ 2227499 (-)
CI01000027_02119227_02124423 NA other downstream 1544191 2119131 ~ 2125142 (-)
CI01000027_01303308_01319462 NR2F5, NR2F1, NR2F1.L, NR2F2 other downstream 2350058 1302034 ~ 1321178 (-)
CI01000027_01241417_01245177 NA other downstream 2423242 1240478 ~ 1246267 (-)
CI01000027_03922380_03931033 NA other upstream 250887 3922242 ~ 3931033 (-)
G141481 NA other upstream 700738 4372247 ~ 4412810 (-)
G141488 NA other upstream 835966 4507475 ~ 4508971 (-)
G141728 NA other upstream 1205558 4877067 ~ 4877766 (-)

Expression


Co-expression Network