G139002


Basic Information

Item Value
gene id G139002
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 3744009 ~ 3744238 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU157936
CTGTTGTTGATTTATATGACCTGCCTGCTGTATGTATGTTGCTGTTCACATCAGGGCAATCAGTCCAAAAATGCTTTCTAAAATACAGAAAAGGGAAGTTTAGACATCACCAGAGTGAATTTGAGCAGGCAGTCTGTCCAAAATAATAATAATAATGTAAATTAACAACAAAAACTATATTATTAGTGTATTGTATTGGATGTAGGCCTATAAATAACACTCAGAAAGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157936 True 230 lncRNA 0.34 1 3744009 3744238

Neighbor

gene id symbol gene type direction distance location
CI01000027_03736903_03741917 NA coding upstream 1327 3736903 ~ 3742682 (+)
CI01000027_03718436_03732820 DYRK1A, DYRK1B, DYRK1A.2.S, DYRK1A.2 coding upstream 10239 3718436 ~ 3733770 (+)
CI01000027_03680285_03687497 ALKBH8 coding upstream 56493 3680285 ~ 3687516 (+)
CI01000027_03675758_03678539 FBL coding upstream 65360 3675758 ~ 3678649 (+)
CI01000027_03660816_03671233 KCNJ9, KCNJ6, KCNJ5 coding upstream 72494 3660816 ~ 3671515 (+)
CI01000027_03744339_03748166 NA coding downstream 101 3744339 ~ 3748166 (+)
CI01000027_03771203_03774232 ETV2 coding downstream 25157 3769395 ~ 3774519 (+)
CI01000027_03776983_03781753 NA coding downstream 31900 3776138 ~ 3781891 (+)
CI01000027_03783310_03784541 NA coding downstream 38684 3782922 ~ 3784541 (+)
CI01000027_03798333_03830899 GRAMD1A coding downstream 53706 3797944 ~ 3831143 (+)
G138985 NA non-coding upstream 118401 3625313 ~ 3625608 (+)
CI01000027_03570192_03600805 CSPG5A non-coding upstream 144198 3570192 ~ 3600805 (+)
G138954 NA non-coding upstream 229336 3507522 ~ 3514673 (+)
G138959 NA non-coding upstream 240816 3447979 ~ 3503193 (+)
G138958 NA non-coding downstream 43117 3787355 ~ 3787850 (+)
G139016 NA non-coding downstream 79808 3824046 ~ 3824435 (+)
G139027 NA non-coding downstream 93967 3838205 ~ 3840442 (+)
G139023 NA non-coding downstream 120775 3865013 ~ 3865517 (+)
G140381 NA non-coding downstream 388600 4132838 ~ 4133069 (+)
G138953 NA other upstream 223944 3502072 ~ 3520065 (+)
G138915 NA other upstream 257362 3484387 ~ 3486647 (+)
G138515 NA other upstream 2067149 1664408 ~ 1676860 (+)
G138436 NA other upstream 2236193 1506961 ~ 1507816 (+)
G138290 NA other upstream 2744828 995970 ~ 999181 (+)
G140436 NA other downstream 993160 4737398 ~ 4774262 (+)
G140440 NA other downstream 1036179 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 1304685 5050310 ~ 5055755 (+)
CI01000027_05069310_05070638 NA other downstream 1325114 5067917 ~ 5070868 (+)
CI01000027_05071693_05072917 NA other downstream 1327824 5071693 ~ 5073136 (+)

Expression


Co-expression Network