Gene
RNA
| Item | Value |
|---|---|
| gene id | G141421 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000027 |
| NCBI id | null |
| chromosome length | 10680226 |
| location | 4158354 ~ 4158602 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU160697 | True | 249 | lncRNA | 0.37 | 1 | 4158354 | 4158602 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000027_04039778_04040714 | NA | coding | downstream | 117640 | 4039109 ~ 4040714 (-) |
| CI01000027_04008272_04011121 | NA | coding | downstream | 145732 | 4008180 ~ 4012622 (-) |
| CI01000027_03969492_03973741 | NA | coding | downstream | 184178 | 3968698 ~ 3974176 (-) |
| CI01000027_03922380_03931033 | NA | coding | downstream | 227321 | 3922242 ~ 3931033 (-) |
| CI01000027_03898513_03905519 | NA | coding | downstream | 251860 | 3897266 ~ 3906494 (-) |
| CI01000027_04206424_04209369 | NA | coding | upstream | 47008 | 4205610 ~ 4209445 (-) |
| CI01000027_04233680_04249553 | SCAP | coding | upstream | 75040 | 4233642 ~ 4249553 (-) |
| CI01000027_04254645_04264857 | NA | coding | upstream | 95565 | 4254167 ~ 4264857 (-) |
| CI01000027_04324807_04339354 | NA | coding | upstream | 166074 | 4324676 ~ 4339354 (-) |
| CI01000027_04401843_04403095 | S100A11, S100T, S100S | coding | upstream | 242888 | 4401490 ~ 4403095 (-) |
| G141405 | NA | non-coding | downstream | 34934 | 4122321 ~ 4123420 (-) |
| G141402 | NA | non-coding | downstream | 37827 | 4120320 ~ 4120527 (-) |
| G140370 | NA | non-coding | downstream | 45525 | 4112596 ~ 4112829 (-) |
| G140363 | NA | non-coding | downstream | 50836 | 4106903 ~ 4107518 (-) |
| G140308 | NA | non-coding | downstream | 121474 | 3998688 ~ 4036880 (-) |
| G141429 | NA | non-coding | upstream | 9790 | 4168392 ~ 4168706 (-) |
| G141461 | NA | non-coding | upstream | 105300 | 4263902 ~ 4264722 (-) |
| G141470 | NA | non-coding | upstream | 122903 | 4281505 ~ 4281829 (-) |
| G141471 | NA | non-coding | upstream | 123307 | 4281909 ~ 4282135 (-) |
| CI01000027_03787377_03788902 | NA | other | downstream | 369132 | 3787377 ~ 3790279 (-) |
| G140118 | NA | other | downstream | 573675 | 3509352 ~ 3584679 (-) |
| CI01000027_02226447_02227499 | NA | other | downstream | 1930329 | 2225781 ~ 2227499 (-) |
| CI01000027_02119227_02124423 | NA | other | downstream | 2032326 | 2119131 ~ 2125142 (-) |
| G141481 | NA | other | upstream | 213645 | 4372247 ~ 4412810 (-) |
| G141488 | NA | other | upstream | 348873 | 4507475 ~ 4508971 (-) |
| G141728 | NA | other | upstream | 718465 | 4877067 ~ 4877766 (-) |
| G141588 | NA | other | upstream | 949733 | 5108335 ~ 5201155 (-) |
| CI01000027_05447458_05450346 | PON2, PON3.2, PON3.1 | other | upstream | 1290724 | 5447424 ~ 5450461 (-) |
