G140482


Basic Information

Item Value
gene id G140482
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 4321390 ~ 4321592 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU159683
AAAAAAAGAAGCTGCGCAAGCCACAGGTCTAGCCATCCGTACCACAAAGCACACAGCCAGTGCATCGACCGTTCAATGGTTGCTATAGTTGCCATGGAGAGACATCTGTGTAAAATCTCTCTCCTTAATGCTCTGATCTCACACTCTGGCTTTTTCGGTCTGCTGGTGAGGCGGTCGTAGAGAAGTTACAGAGCCGGGGTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU159683 True 203 lncRNA 0.50 1 4321390 4321592

Neighbor

gene id symbol gene type direction distance location
CI01000027_04213570_04229519 PTPN23, PTPN23A coding upstream 91713 4212498 ~ 4229677 (+)
CI01000027_04054186_04103227 NA coding upstream 216970 4053038 ~ 4104420 (+)
CI01000027_04015806_04037491 NA coding upstream 282616 4015730 ~ 4038774 (+)
CI01000027_04012798_04014351 NA coding upstream 307039 4012747 ~ 4014351 (+)
CI01000027_03998691_04000730 RPP25L coding upstream 320556 3998168 ~ 4000834 (+)
CI01000027_04350540_04357555 SHE coding downstream 28422 4350014 ~ 4358099 (+)
CI01000027_04381523_04393547 CHRNB2B coding downstream 59931 4381523 ~ 4394114 (+)
CI01000027_04470309_04483532 NA coding downstream 148553 4470145 ~ 4483559 (+)
CI01000027_04485614_04488056 NA coding downstream 162299 4483891 ~ 4488056 (+)
CI01000027_04488278_04495470 FLAD1 coding downstream 166686 4488278 ~ 4496077 (+)
G140408 NA non-coding upstream 110959 4210199 ~ 4210431 (+)
G140394 NA non-coding upstream 146045 4174904 ~ 4175345 (+)
G140392 NA non-coding upstream 146729 4170063 ~ 4174661 (+)
G140391 NA non-coding upstream 152755 4168409 ~ 4168635 (+)
G140386 NA non-coding upstream 174596 4146488 ~ 4146794 (+)
G140489 NA non-coding downstream 40457 4362049 ~ 4362257 (+)
G140490 NA non-coding downstream 79897 4401489 ~ 4403088 (+)
G140447 NA non-coding downstream 82734 4404326 ~ 4413069 (+)
G140495 NA non-coding downstream 92762 4414354 ~ 4414576 (+)
G140465 NA non-coding downstream 106445 4428037 ~ 4430693 (+)
G138953 NA other upstream 801325 3502072 ~ 3520065 (+)
G138915 NA other upstream 834743 3484387 ~ 3486647 (+)
G138515 NA other upstream 2644530 1664408 ~ 1676860 (+)
G138436 NA other upstream 2813574 1506961 ~ 1507816 (+)
G138290 NA other upstream 3322209 995970 ~ 999181 (+)
G140436 NA other downstream 415806 4737398 ~ 4774262 (+)
G140440 NA other downstream 458825 4780417 ~ 4785660 (+)
CI01000027_05050310_05055447 NA other downstream 727331 5050310 ~ 5055755 (+)
CI01000027_05069310_05070638 NA other downstream 747760 5067917 ~ 5070868 (+)
CI01000027_05071693_05072917 NA other downstream 750470 5071693 ~ 5073136 (+)

Expression


Co-expression Network