Gene
RNA
| Item | Value |
|---|---|
| gene id | G140440 |
| gene name | NA |
| gene type | unknown |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000027 |
| NCBI id | null |
| chromosome length | 10680226 |
| location | 4780417 ~ 4785660 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU159637 | False | 1256 | TUCP | 0.37 | 4 | 4780417 | 4784404 |
| TU159638 | False | 1084 | TUCP | 0.36 | 3 | 4780417 | 4784404 |
| TU159641 | False | 2340 | TUCP | 0.34 | 3 | 4780417 | 4785660 |
| TU159640 | True | 1018 | TUCP | 0.36 | 3 | 4782442 | 4784404 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000027_04777135_04777760 | NA | coding | upstream | 1104 | 4776487 ~ 4779338 (+) |
| CI01000027_04774573_04774740 | NA | coding | upstream | 5439 | 4774573 ~ 4775489 (+) |
| CI01000027_04768212_04770488 | KRTCAP2 | coding | upstream | 9730 | 4768212 ~ 4770687 (+) |
| CI01000027_04725469_04727486 | EFNA1B | coding | upstream | 52134 | 4723893 ~ 4728283 (+) |
| CI01000027_04713891_04717190 | NA | coding | upstream | 63058 | 4713780 ~ 4717359 (+) |
| CI01000027_04835989_04851147 | SNX27.L, SNX27B, SNX27, SNX27A | coding | downstream | 50329 | 4835989 ~ 4851178 (+) |
| CI01000027_04860802_04872130 | NA | coding | downstream | 75142 | 4860802 ~ 4872566 (+) |
| CI01000027_04887494_04956477 | KCNN3 | coding | downstream | 101656 | 4887316 ~ 4957488 (+) |
| CI01000027_04978217_04987503 | NA | coding | downstream | 192557 | 4978217 ~ 4987503 (+) |
| CI01000027_05018992_05033275 | NA | coding | downstream | 232600 | 5018260 ~ 5034290 (+) |
| G140436 | NA | non-coding | upstream | 1079 | 4737398 ~ 4774262 (+) |
| G140455 | NA | non-coding | upstream | 43749 | 4733708 ~ 4736668 (+) |
| G140597 | NA | non-coding | upstream | 71422 | 4708788 ~ 4708995 (+) |
| G140596 | NA | non-coding | upstream | 71911 | 4708225 ~ 4708506 (+) |
| G140587 | NA | non-coding | upstream | 87713 | 4692134 ~ 4692704 (+) |
| G140475 | NA | non-coding | downstream | 39280 | 4824940 ~ 4825988 (+) |
| G140633 | NA | non-coding | downstream | 47352 | 4833012 ~ 4833260 (+) |
| G140454 | NA | non-coding | downstream | 87455 | 4873115 ~ 4874023 (+) |
| G140640 | NA | non-coding | downstream | 96420 | 4882080 ~ 4882366 (+) |
| G140641 | NA | non-coding | downstream | 96919 | 4882579 ~ 4882895 (+) |
| G138953 | NA | other | upstream | 1260352 | 3502072 ~ 3520065 (+) |
| G138915 | NA | other | upstream | 1293770 | 3484387 ~ 3486647 (+) |
| G138515 | NA | other | upstream | 3103557 | 1664408 ~ 1676860 (+) |
| G138436 | NA | other | upstream | 3272601 | 1506961 ~ 1507816 (+) |
| CI01000027_05050310_05055447 | NA | other | downstream | 263263 | 5050310 ~ 5055755 (+) |
| CI01000027_05069310_05070638 | NA | other | downstream | 283692 | 5067917 ~ 5070868 (+) |
| CI01000027_05071693_05072917 | NA | other | downstream | 286402 | 5071693 ~ 5073136 (+) |
| G140862 | NA | other | downstream | 926952 | 5712612 ~ 5712702 (+) |
| CI01000027_05757143_05758496 | NA | other | downstream | 971322 | 5756982 ~ 5758881 (+) |
