G140640


Basic Information

Item Value
gene id G140640
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 4882080 ~ 4882366 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU159847
GCCATGTATATTTTTAGTCCAACTGTGCGTGTGTGTTTTCTCTATGTCTTTCCATTAAAGGTTACAGTTATTTGTTTGGAAAAGGGATATATGGTGTGTGTGTGTGTGTTCATACTTGTATGGGATCTAAAGCAAAGTGTTTGACGTAACGCCAGACTGTTACTGTGGCACCCCTCTCACTTTCTGTTTACTTGTCTCTGTTTGTCCATCTGTCTCTCTTCTCTTTCTCCCTCTGCCCCCCATCACTCACACTCTCTAATGTCTGTCATTTCTTCTCCTTATCTTCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU159847 True 287 lncRNA 0.41 1 4882080 4882366

Neighbor

gene id symbol gene type direction distance location
CI01000027_04860802_04872130 NA coding upstream 9514 4860802 ~ 4872566 (+)
CI01000027_04835989_04851147 SNX27.L, SNX27B, SNX27, SNX27A coding upstream 30902 4835989 ~ 4851178 (+)
CI01000027_04777135_04777760 NA coding upstream 102767 4776487 ~ 4779338 (+)
CI01000027_04774573_04774740 NA coding upstream 107102 4774573 ~ 4775489 (+)
CI01000027_04768212_04770488 KRTCAP2 coding upstream 111393 4768212 ~ 4770687 (+)
CI01000027_04887494_04956477 KCNN3 coding downstream 4950 4887316 ~ 4957488 (+)
CI01000027_04978217_04987503 NA coding downstream 95851 4978217 ~ 4987503 (+)
CI01000027_05018992_05033275 NA coding downstream 135894 5018260 ~ 5034290 (+)
CI01000027_05050310_05055447 NA coding downstream 167944 5050310 ~ 5055755 (+)
CI01000027_05061061_05063086 APOEB coding downstream 177373 5059739 ~ 5063414 (+)
G140454 NA non-coding upstream 8057 4873115 ~ 4874023 (+)
G140633 NA non-coding upstream 48820 4833012 ~ 4833260 (+)
G140475 NA non-coding upstream 56092 4824940 ~ 4825988 (+)
G140435 NA non-coding upstream 59435 4736894 ~ 4822645 (+)
G140436 NA non-coding upstream 102742 4737398 ~ 4774262 (+)
G140641 NA non-coding downstream 213 4882579 ~ 4882895 (+)
G140642 NA non-coding downstream 1043 4883409 ~ 4883610 (+)
G140643 NA non-coding downstream 1319 4883685 ~ 4883910 (+)
G140645 NA non-coding downstream 3253 4885619 ~ 4885818 (+)
G140437 NA non-coding downstream 93361 4975727 ~ 4991547 (+)
G140440 NA other upstream 96420 4780417 ~ 4785660 (+)
G138953 NA other upstream 1362015 3502072 ~ 3520065 (+)
G138915 NA other upstream 1395433 3484387 ~ 3486647 (+)
G138515 NA other upstream 3205220 1664408 ~ 1676860 (+)
CI01000027_05069310_05070638 NA other downstream 186986 5067917 ~ 5070868 (+)
CI01000027_05071693_05072917 NA other downstream 189696 5071693 ~ 5073136 (+)
G140862 NA other downstream 830246 5712612 ~ 5712702 (+)
CI01000027_05757143_05758496 NA other downstream 874616 5756982 ~ 5758881 (+)

Expression


Co-expression Network