G140672


Basic Information

Item Value
gene id G140672
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 5038545 ~ 5038798 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU159881
TTTAATTAGAGTTGTAAGTTAACTAAACTTTGCAGGAAGTGGTTCTCCAGGAGTGGGACTTGACACCCCTATACTAATGGAAGCTGCCTTATTCATGTATGCAATTCTCCTCCATAGTACATACCTCCTTTTGCCTGGAGTCAAATCTCTGTAGTTGACTCCTGGTAACTCCATCCATATACCAAGACTAATAGTCAGCATCGATCCTTCCATTGCCTAGGAGACCAGAAGGACAAAGTTTGTCAATAAAGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU159881 True 254 lncRNA 0.42 1 5038545 5038798

Neighbor

gene id symbol gene type direction distance location
CI01000027_05018992_05033275 NA coding upstream 4255 5018260 ~ 5034290 (+)
CI01000027_04978217_04987503 NA coding upstream 51042 4978217 ~ 4987503 (+)
CI01000027_04887494_04956477 KCNN3 coding upstream 81057 4887316 ~ 4957488 (+)
CI01000027_04860802_04872130 NA coding upstream 165979 4860802 ~ 4872566 (+)
CI01000027_04835989_04851147 SNX27.L, SNX27B, SNX27, SNX27A coding upstream 187367 4835989 ~ 4851178 (+)
CI01000027_05050310_05055447 NA coding downstream 11512 5050310 ~ 5055755 (+)
CI01000027_05061061_05063086 APOEB coding downstream 20941 5059739 ~ 5063414 (+)
CI01000027_05069310_05070638 NA coding downstream 29119 5067917 ~ 5070868 (+)
CI01000027_05071693_05072917 NA coding downstream 32895 5071693 ~ 5073136 (+)
CI01000027_05074328_05075547 NA coding downstream 35530 5074328 ~ 5075740 (+)
G140437 NA non-coding upstream 46998 4975727 ~ 4991547 (+)
G140645 NA non-coding upstream 152727 4885619 ~ 4885818 (+)
G140643 NA non-coding upstream 154635 4883685 ~ 4883910 (+)
G140642 NA non-coding upstream 154935 4883409 ~ 4883610 (+)
G140674 NA non-coding downstream 443 5039241 ~ 5039487 (+)
G140683 NA non-coding downstream 63593 5102391 ~ 5108232 (+)
G140685 NA non-coding downstream 71021 5109819 ~ 5114502 (+)
G140684 NA non-coding downstream 79670 5118468 ~ 5164862 (+)
G140680 NA non-coding downstream 158828 5197626 ~ 5201086 (+)
G140440 NA other upstream 252885 4780417 ~ 4785660 (+)
G140436 NA other upstream 259207 4737398 ~ 4774262 (+)
G138953 NA other upstream 1518480 3502072 ~ 3520065 (+)
G138915 NA other upstream 1551898 3484387 ~ 3486647 (+)
G138515 NA other upstream 3361685 1664408 ~ 1676860 (+)
G140862 NA other downstream 673814 5712612 ~ 5712702 (+)
CI01000027_05757143_05758496 NA other downstream 718184 5756982 ~ 5758881 (+)

Expression


Co-expression Network