G140734


Basic Information

Item Value
gene id G140734
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 5203196 ~ 5203505 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU159946
AAAAAAAAAAAATCAATTTTTAGCAAGTTATGAAGTAAAATATCTAGCTTCCGCCAGACTGCCTTCCATATCCAAATTACAGAAAAAAACAGAACTGGCGTTGCGTCAGTTAAGCTTTTTCCATAAGTTGAATAGGGAAGGTGTAGGACGTCGTGTAAGCGTTTTGAACTGCGAGAGTTTTACACTTTCTTCGTAAGTTGAATATGGAAGGCAGTCTGGCGGAAGCTAAATATTTATGGATATTTTTTTTACACAAACACATCGCTTCACTTCAGAAGGCCTTTATTAACCTCGCAGAGCCGTGTTTATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU159946 True 310 lncRNA 0.37 1 5203196 5203505

Neighbor

gene id symbol gene type direction distance location
CI01000027_05157946_05159188 NA coding upstream 43950 5156133 ~ 5159246 (+)
CI01000027_05082223_05082843 APOC2 coding upstream 120003 5081616 ~ 5083193 (+)
CI01000027_05074328_05075547 NA coding upstream 127456 5074328 ~ 5075740 (+)
CI01000027_05071693_05072917 NA coding upstream 130084 5071693 ~ 5073136 (+)
CI01000027_05069310_05070638 NA coding upstream 132544 5067917 ~ 5070868 (+)
CI01000027_05205628_05209568 NA coding downstream 1582 5205087 ~ 5210170 (+)
CI01000027_05272101_05283619 NA coding downstream 66826 5270331 ~ 5283941 (+)
CI01000027_05398796_05408689 NA coding downstream 194903 5398408 ~ 5410067 (+)
CI01000027_05444238_05445884 NA coding downstream 240378 5443883 ~ 5446211 (+)
CI01000027_05461577_05471900 YWHAZ, YWHABA, YWHAB, 143B1, YWHABL coding downstream 256088 5459593 ~ 5472892 (+)
G140680 NA non-coding upstream 2110 5197626 ~ 5201086 (+)
G140684 NA non-coding upstream 38334 5118468 ~ 5164862 (+)
G140685 NA non-coding upstream 88694 5109819 ~ 5114502 (+)
G140683 NA non-coding upstream 94964 5102391 ~ 5108232 (+)
G140674 NA non-coding upstream 163709 5039241 ~ 5039487 (+)
G140748 NA non-coding downstream 20122 5223627 ~ 5239327 (+)
G140837 NA non-coding downstream 163529 5367034 ~ 5367304 (+)
G140838 NA non-coding downstream 163878 5367383 ~ 5367631 (+)
G140739 NA non-coding downstream 167256 5370761 ~ 5376536 (+)
G140832 NA non-coding downstream 207777 5411282 ~ 5412302 (+)
CI01000027_05050310_05055447 NA other upstream 147257 5050310 ~ 5055755 (+)
G140440 NA other upstream 417536 4780417 ~ 4785660 (+)
G140436 NA other upstream 423858 4737398 ~ 4774262 (+)
G140862 NA other downstream 509107 5712612 ~ 5712702 (+)
CI01000027_05757143_05758496 NA other downstream 553477 5756982 ~ 5758881 (+)
G140924 NA other downstream 759701 5963206 ~ 5965326 (+)
G141052 NA other downstream 1067862 6271367 ~ 6271600 (+)
CI01000027_06706050_06708485 NA other downstream 1502872 6705983 ~ 6708513 (+)

Expression


Co-expression Network