G140748


Basic Information

Item Value
gene id G140748
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 5223627 ~ 5239327 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU159962
AAAAACACGTCATCCTTAAGGTACTCTATAGAGGTCCAGAAAGGTAGGAAAGACATCATTAAAGTACTCCATGCAACTCCAGTGGTTTAACCTCAATTTTATGAAGCAACGTGAGTGCTTTGTGCAAAAAAACAAATTTACCACTTTATTTACAAAATATTATCCAAAGCATGCAACGCCAGCTCTCGCGTGAACACAAAACGCATGTGTCGTGATGCTCTCGTGAACACTCGCGCATGTGCGTTGAGTTGACGCACGAGTCTGAACACAACACGCACGCGTTGTAAACTCACGAACGTGCGTTGCAGATCAATATTTTTGTAAGTGGTAAATTGTGTTTTTTTCACACTGCAGCTAAATTCGGTTGTCAGTTCACTATTTAGTACTTAATCCCGTTGTTAAAATATGGGAGTGACAACTGCATTCTACAACTGAATTAACTCCCGAAAAATGCAGGTAGTGACAACCGCATTTACAAAAAAATCTATGCAGTGTGCACGGAACCAAACTGAACAACTAGTTGTTAATGACATTAAGGTGCATCGGAGATGTGTCTCTCTTCTGTATGCGCGGTGAATCACAGGGAAAGCACGACTCATTTGTGTTGCTAGATCTTGCTAGAAAAAATCAGCGAGCATAACCATAATAAATCCAAATGCTTTATGCTGAATATAAGACAAAAAATATCACGATTCATGTCTGCTCACTTTAATAACTTCATAAACCCGTTCGCTTTATGAGACGAGCTTAAACAAGCCCCAATGAGTGATCATGGCAACAGAAAGAGCGCGCTGTGTGAAACAGGCTGTACAAGCATAAACAAAACACGACGCCTCCGTCGACTGTTTAGTTAAAATTCTGAAAAAAACGAGTGTTTTGTCACTGTAATATTACTTTGTTCACAATAACGGATACCAAACATAAGAGACGCCAGAACATTGCTATGGTTTCCAAGCTGTCAATCATCGCATTTTCGAGAGTGAGTCGTGTTTCATACACACATGTAAGGATAATTTAGGGGAATTCACTCCCGCATTTAAATGCGGTTGTGACTCCTGAAACTTGTACATGGCCATGGAGTAGGCCTACTGTAATGATGTCATTCCTACCTTTCTGGACCTTGAAAGTTGTAGTTGCGTTGGATCTNNNNNNNNNNCAGAAACCTCTCAGATTTCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU159962 True 1177 lncRNA 0.40 2 5223627 5239327

Neighbor

gene id symbol gene type direction distance location
CI01000027_05205628_05209568 NA coding upstream 13457 5205087 ~ 5210170 (+)
CI01000027_05157946_05159188 NA coding upstream 64381 5156133 ~ 5159246 (+)
CI01000027_05082223_05082843 APOC2 coding upstream 140434 5081616 ~ 5083193 (+)
CI01000027_05074328_05075547 NA coding upstream 147887 5074328 ~ 5075740 (+)
CI01000027_05071693_05072917 NA coding upstream 150515 5071693 ~ 5073136 (+)
CI01000027_05272101_05283619 NA coding downstream 31004 5270331 ~ 5283941 (+)
CI01000027_05398796_05408689 NA coding downstream 159081 5398408 ~ 5410067 (+)
CI01000027_05444238_05445884 NA coding downstream 204556 5443883 ~ 5446211 (+)
CI01000027_05461577_05471900 YWHAZ, YWHABA, YWHAB, 143B1, YWHABL coding downstream 220266 5459593 ~ 5472892 (+)
CI01000027_05483140_05487852 NA coding downstream 243547 5482874 ~ 5488587 (+)
G140734 NA non-coding upstream 20122 5203196 ~ 5203505 (+)
G140680 NA non-coding upstream 22541 5197626 ~ 5201086 (+)
G140684 NA non-coding upstream 58765 5118468 ~ 5164862 (+)
G140685 NA non-coding upstream 109125 5109819 ~ 5114502 (+)
G140683 NA non-coding upstream 115395 5102391 ~ 5108232 (+)
G140837 NA non-coding downstream 127707 5367034 ~ 5367304 (+)
G140838 NA non-coding downstream 128056 5367383 ~ 5367631 (+)
G140739 NA non-coding downstream 131434 5370761 ~ 5376536 (+)
G140832 NA non-coding downstream 171955 5411282 ~ 5412302 (+)
G140843 NA non-coding downstream 173100 5412427 ~ 5412735 (+)
CI01000027_05069310_05070638 NA other upstream 152759 5067917 ~ 5070868 (+)
CI01000027_05050310_05055447 NA other upstream 167688 5050310 ~ 5055755 (+)
G140440 NA other upstream 437967 4780417 ~ 4785660 (+)
G140436 NA other upstream 444289 4737398 ~ 4774262 (+)
G140862 NA other downstream 473285 5712612 ~ 5712702 (+)
CI01000027_05757143_05758496 NA other downstream 517655 5756982 ~ 5758881 (+)
G140924 NA other downstream 723879 5963206 ~ 5965326 (+)
G141052 NA other downstream 1032040 6271367 ~ 6271600 (+)
CI01000027_06706050_06708485 NA other downstream 1467050 6705983 ~ 6708513 (+)

Expression


Co-expression Network