G140832


Basic Information

Item Value
gene id G140832
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 5411282 ~ 5412302 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU160051
ATCTGCTTGGTTACTGACATTCTTCCAAATATCTTCCTTTGTGTTAAGCAGAACAAAGAAATTTATACAGGTTTGGAACAACTTGAGGGGGAGTAAATGACAGAATTTTCAATTTTGGGTGAACCATCCCTTTAAATGTTTAGTAACCACTAGTTAGTTTCCAACTCTGTTTTTTGATTCAGTTGCACCATTAGTTCTTAAGACAAGCCTTTATTAGTCTTTCTAAGCCCTCCACAAAGTAATGTACAGTTGCATAAAGATGTCCGATTTTACTGATCCAATAAATGGCCTTACAATTTGTAAACAAAAAGATGTTTAAAAAAAAAAAAAAAAAAAGCTGTGCATTTTTAGATTATCTTGTTATGGTTGTTGTCAAAACTGTTAATGGATGGAATGGATTCAATAGTATATTTCAATATACAAATAATAAATATTCAATAACTAAAATTCTAAAATAATATAAAATACAAGACATAAATACTAAAATTTTACAGTTGTCTTACATTTTGTTGAAACCTGGCATGCACAAATTACACAGGGCGACACACAGGAATGTGCATAGTTCCATGCTGGAGAGCTGCTAAGAAGTCATTTATTCTGTATTAAAATGTAAACTAGTGTAAATATCAATTTCATCATATCTGTCTAAAGGATTGAGTCTGAGTCAGTCTGCTAATCGTTATTCCTCTGTAAATATTTCCATAAATGCCTTTTTAGATCAAAGCCTCATATAATATCAATAAAAGCAAATTACTCATGCATAAGCAAAATAACTGCGGTCAGATGAAAGGTGCCATTAGCACTATATGAACACAAAAGGATATAATGTAGCACAAGTGCTACTGAGTGACCTAAAAGTACAGCAATAGATCAGCATTTAGGCTGAGGTTACAAAAAGAGGTCAAGCAGGTTCTACTCTCCTCCACATTCCTGTAAGTAACTTTGTGCATCTGAGCATTTCCTCTCGCTATAACGAGCCGCCCCATCGCACCATCCGCTTTACACCGTTTGAGGGGGAACT

Function

NR:

description
histone H2A.V isoform 5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160051 True 1021 lncRNA 0.34 1 5411282 5412302

Neighbor

gene id symbol gene type direction distance location
CI01000027_05398796_05408689 NA coding upstream 1215 5398408 ~ 5410067 (+)
CI01000027_05272101_05283619 NA coding upstream 127341 5270331 ~ 5283941 (+)
CI01000027_05205628_05209568 NA coding upstream 201112 5205087 ~ 5210170 (+)
CI01000027_05157946_05159188 NA coding upstream 252036 5156133 ~ 5159246 (+)
CI01000027_05082223_05082843 APOC2 coding upstream 328089 5081616 ~ 5083193 (+)
CI01000027_05444238_05445884 NA coding downstream 31581 5443883 ~ 5446211 (+)
CI01000027_05461577_05471900 YWHAZ, YWHABA, YWHAB, 143B1, YWHABL coding downstream 47291 5459593 ~ 5472892 (+)
CI01000027_05483140_05487852 NA coding downstream 70572 5482874 ~ 5488587 (+)
CI01000027_05489565_05492924 NA coding downstream 77263 5489565 ~ 5492969 (+)
CI01000027_05542184_05551414 NA coding downstream 129113 5541415 ~ 5553150 (+)
G140739 NA non-coding upstream 34746 5370761 ~ 5376536 (+)
G140838 NA non-coding upstream 43651 5367383 ~ 5367631 (+)
G140837 NA non-coding upstream 43978 5367034 ~ 5367304 (+)
G140748 NA non-coding upstream 171955 5223627 ~ 5239327 (+)
G140734 NA non-coding upstream 207777 5203196 ~ 5203505 (+)
G140843 NA non-coding downstream 125 5412427 ~ 5412735 (+)
G140933 NA non-coding downstream 66660 5478962 ~ 5479215 (+)
CI01000027_05563090_05579132 NA non-coding downstream 148049 5560351 ~ 5579146 (+)
G140929 NA non-coding downstream 154265 5566567 ~ 5567653 (+)
CI01000027_05071693_05072917 NA other upstream 338146 5071693 ~ 5073136 (+)
CI01000027_05069310_05070638 NA other upstream 340414 5067917 ~ 5070868 (+)
CI01000027_05050310_05055447 NA other upstream 355343 5050310 ~ 5055755 (+)
G140440 NA other upstream 625622 4780417 ~ 4785660 (+)
G140436 NA other upstream 631944 4737398 ~ 4774262 (+)
G140862 NA other downstream 300310 5712612 ~ 5712702 (+)
CI01000027_05757143_05758496 NA other downstream 344680 5756982 ~ 5758881 (+)
G140924 NA other downstream 550904 5963206 ~ 5965326 (+)
G141052 NA other downstream 859065 6271367 ~ 6271600 (+)
CI01000027_06706050_06708485 NA other downstream 1294075 6705983 ~ 6708513 (+)

Expression


Co-expression Network