G140843


Basic Information

Item Value
gene id G140843
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 5412427 ~ 5412735 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU160062
CCTCATGTCAATCCAAACCCGTAAGGCCTTTGTTCATCTTTGGAACACAAATTAAGATATTTTTGATGAAATCCAGTGGCTCAGTGAGGCCTCCATTGCCAGCAAGATAATTAACACTTTCAGATGCCCAGAAAGCTACTAAAAACATATTTAAAACAGTTCATGTGACTATAGTGGTTCAACCTTAATGTTATGAAGTGACACTTTTTGAGCACCAAAAAAACAAAATAATAATATCTAGTGATGAGCAATTTCAAAACACTGCTTCATGAAGCTTCATTCGAATCTTTTGTTTCGAATCAGTGGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160062 True 309 lncRNA 0.35 1 5412427 5412735

Neighbor

gene id symbol gene type direction distance location
CI01000027_05398796_05408689 NA coding upstream 2360 5398408 ~ 5410067 (+)
CI01000027_05272101_05283619 NA coding upstream 128486 5270331 ~ 5283941 (+)
CI01000027_05205628_05209568 NA coding upstream 202257 5205087 ~ 5210170 (+)
CI01000027_05157946_05159188 NA coding upstream 253181 5156133 ~ 5159246 (+)
CI01000027_05082223_05082843 APOC2 coding upstream 329234 5081616 ~ 5083193 (+)
CI01000027_05444238_05445884 NA coding downstream 31148 5443883 ~ 5446211 (+)
CI01000027_05461577_05471900 YWHAZ, YWHABA, YWHAB, 143B1, YWHABL coding downstream 46858 5459593 ~ 5472892 (+)
CI01000027_05483140_05487852 NA coding downstream 70139 5482874 ~ 5488587 (+)
CI01000027_05489565_05492924 NA coding downstream 76830 5489565 ~ 5492969 (+)
CI01000027_05542184_05551414 NA coding downstream 128680 5541415 ~ 5553150 (+)
G140832 NA non-coding upstream 125 5411282 ~ 5412302 (+)
G140739 NA non-coding upstream 35891 5370761 ~ 5376536 (+)
G140838 NA non-coding upstream 44796 5367383 ~ 5367631 (+)
G140837 NA non-coding upstream 45123 5367034 ~ 5367304 (+)
G140748 NA non-coding upstream 173100 5223627 ~ 5239327 (+)
G140933 NA non-coding downstream 66227 5478962 ~ 5479215 (+)
CI01000027_05563090_05579132 NA non-coding downstream 147616 5560351 ~ 5579146 (+)
G140929 NA non-coding downstream 153832 5566567 ~ 5567653 (+)
G140920 NA non-coding downstream 189794 5602529 ~ 5608115 (+)
CI01000027_05071693_05072917 NA other upstream 339291 5071693 ~ 5073136 (+)
CI01000027_05069310_05070638 NA other upstream 341559 5067917 ~ 5070868 (+)
CI01000027_05050310_05055447 NA other upstream 356488 5050310 ~ 5055755 (+)
G140440 NA other upstream 626767 4780417 ~ 4785660 (+)
G140436 NA other upstream 633089 4737398 ~ 4774262 (+)
G140862 NA other downstream 299877 5712612 ~ 5712702 (+)
CI01000027_05757143_05758496 NA other downstream 344247 5756982 ~ 5758881 (+)
G140924 NA other downstream 550471 5963206 ~ 5965326 (+)
G141052 NA other downstream 858632 6271367 ~ 6271600 (+)
CI01000027_06706050_06708485 NA other downstream 1293642 6705983 ~ 6708513 (+)

Expression


Co-expression Network