G140929


Basic Information

Item Value
gene id G140929
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 5566567 ~ 5567653 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU160148
GGGATATGGGATGCAATGAGCTTGTGGTCTTGATTGGTAGTCCTCTCTCTATTTCTCAGGCACACACACATTGACTATGTTGGGAGTCCTTCCCCATCCTACCATATTAGTTTTTTTTTTTGTTTAATATGTTTCAACCTTTATATTGATCTATTTAAAATGGCAATTATGCTTTTTCTAATGTCACATTATTGTAATTTGATGTTTTGTCTTTTTCCTTTCTTTCGTCTGCTGCTCAGAGATCAGTGATCGATCACATGCACAGAATGCCTTTTCTTTTCCCTTTGTTCCAGTCAATTTGGATCATTTGCAATATCACGGCACCCCACCACCATCATCAACAGGCACACAGGCATCACCCTCTCCCTCCCATTTTCCTTCTCTCTCTTTCCCCTCTCTCTTTCACACACACACTCCCGATCTCTTCACTTTGCAGCAAAATGATGCATAATGGGAGCAGGAAGAGGGTTGAAAGACAATGGAGTAAATTAGTAACAAGAAATAGTGTAGAACACTACACAAGACCACCATGAACATCACATGGATATATTGCTTTTGTCTGGAGTCACTGCATGATCAAGACAAACTAGCCTCACCTATGTTAAAGGGATAGTTCACCCAAAAATTAAAATTCTGCCATCATTTGCCCACTCTCATGTCATTCTAAATCTTTAAGTCAGACTTTCTTTTTTTTATGTGGAACACAAAAGGAGATATTTTGAAGAATGTTGGTAACCAAACAGTTTCGGCTCCCATAGACTTCAATTGTATTTTTTCTATATAATGGAAGTCAATCGGAACCCACCAGTATTCTTTAAAATATCTTCTATGTTCCACAGAAAAAACAAAAGTCATACAAGTTTGGAAAGTAGTAGTGAGTAAATGATGAATTTTCATTTTTAGGTGAAACACAATTTTCATTTTTGGGTGGACTGACTCTTTAAAGTAAATAAATTATGTAATTTATTACTCATCCTGATGTCGTTCCACACCCATAAGACCTTCGTTCATCTTCGGAACACAAATTAAGATATTTTTGATAAAAATCCGATGGCTCAGTAAGGCCTGCATCGCCAGCAAGAACACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160148 True 1087 lncRNA 0.37 1 5566567 5567653

Neighbor

gene id symbol gene type direction distance location
CI01000027_05542184_05551414 NA coding upstream 14521 5541415 ~ 5553150 (+)
CI01000027_05489565_05492924 NA coding upstream 73598 5489565 ~ 5492969 (+)
CI01000027_05483140_05487852 NA coding upstream 77980 5482874 ~ 5488587 (+)
CI01000027_05461577_05471900 YWHAZ, YWHABA, YWHAB, 143B1, YWHABL coding upstream 93675 5459593 ~ 5472892 (+)
CI01000027_05444238_05445884 NA coding upstream 120356 5443883 ~ 5446211 (+)
CI01000027_05612215_05613339 FPR1 coding downstream 43601 5611254 ~ 5613416 (+)
CI01000027_05624635_05626386 NA coding downstream 56873 5624526 ~ 5626605 (+)
CI01000027_05654573_05657504 NA coding downstream 86920 5654573 ~ 5657504 (+)
CI01000027_05657678_05659351 NA coding downstream 90025 5657678 ~ 5659351 (+)
CI01000027_05659449_05662678 NA coding downstream 91796 5659449 ~ 5662957 (+)
CI01000027_05563090_05579132 NA non-coding upstream 97 5560351 ~ 5579146 (+)
G140933 NA non-coding upstream 87352 5478962 ~ 5479215 (+)
G140843 NA non-coding upstream 153832 5412427 ~ 5412735 (+)
G140832 NA non-coding upstream 154265 5411282 ~ 5412302 (+)
G140920 NA non-coding downstream 34876 5602529 ~ 5608115 (+)
G140946 NA non-coding downstream 42220 5609873 ~ 5610178 (+)
G140858 NA non-coding downstream 52003 5619656 ~ 5681459 (+)
G140894 NA non-coding downstream 182578 5750231 ~ 5753375 (+)
G140950 NA non-coding downstream 254157 5821810 ~ 5822331 (+)
CI01000027_05071693_05072917 NA other upstream 493431 5071693 ~ 5073136 (+)
CI01000027_05069310_05070638 NA other upstream 495699 5067917 ~ 5070868 (+)
CI01000027_05050310_05055447 NA other upstream 510628 5050310 ~ 5055755 (+)
G140440 NA other upstream 780907 4780417 ~ 4785660 (+)
G140436 NA other upstream 787229 4737398 ~ 4774262 (+)
G140862 NA other downstream 144959 5712612 ~ 5712702 (+)
CI01000027_05757143_05758496 NA other downstream 189329 5756982 ~ 5758881 (+)
G140924 NA other downstream 395553 5963206 ~ 5965326 (+)
G141052 NA other downstream 703714 6271367 ~ 6271600 (+)
CI01000027_06706050_06708485 NA other downstream 1138724 6705983 ~ 6708513 (+)

Expression


Co-expression Network