G140950


Basic Information

Item Value
gene id G140950
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 5821810 ~ 5822331 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU160175
CTATTAAAAAAGGTTCAAACATTCACTGATGCTCCAGAAGGAAACACGATGCATTGAGAGTCAGGGGTGAAAACTTTTGAACAGGATGAAGATGTCCAAATTTTTCTTATTTTGTTTAAATATCAATTTTCTTCATTTGGTACTGCCCTTTGGAAGCAACAGAAGATACCTACATGTTTCCCAGAGACAAATTAAGTACAATTTACCTTGATCTTCAAATTCAAAAAGTTTTCTTAATGCATCGTGTTTCCTTCTGGAGCATCAGTGAATGTTTGAACCTTTTTTAATAGTTGTGTTTGAGTCCTTCAATTGTCCTCAGTGTGAAAAGACGGATCTCAAAATCATACAGTCACTGCTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160175 True 360 lncRNA 0.35 2 5821810 5822331

Neighbor

gene id symbol gene type direction distance location
CI01000027_05807381_05817636 TBC1D31 coding upstream 4145 5807029 ~ 5817665 (+)
CI01000027_05805062_05805690 NA coding upstream 15787 5805062 ~ 5806023 (+)
CI01000027_05789308_05795504 FBXO32 coding upstream 25751 5789156 ~ 5796059 (+)
CI01000027_05781043_05784234 KLHL38B coding upstream 37395 5780606 ~ 5784415 (+)
CI01000027_05757143_05758496 NA coding upstream 62929 5756982 ~ 5758881 (+)
CI01000027_05836494_05847115 NA coding downstream 14163 5836494 ~ 5847601 (+)
CI01000027_05882855_05906234 JARID2A coding downstream 60524 5882855 ~ 5906234 (+)
CI01000027_05931114_05936800 MYLIPB coding downstream 108783 5931114 ~ 5936957 (+)
CI01000027_05981521_05983935 ZHX2, ZHX2A coding downstream 159025 5981356 ~ 5984703 (+)
CI01000027_05994575_05998236 NSMCE2 coding downstream 172244 5994575 ~ 5998353 (+)
G140894 NA non-coding upstream 68435 5750231 ~ 5753375 (+)
G140858 NA non-coding upstream 140351 5619656 ~ 5681459 (+)
G140946 NA non-coding upstream 211632 5609873 ~ 5610178 (+)
G140920 NA non-coding upstream 213695 5602529 ~ 5608115 (+)
G140929 NA non-coding upstream 254157 5566567 ~ 5567653 (+)
G140869 NA non-coding downstream 84465 5906796 ~ 5911149 (+)
G140893 NA non-coding downstream 135958 5958289 ~ 5959908 (+)
G140875 NA non-coding downstream 191358 6013689 ~ 6017411 (+)
G140889 NA non-coding downstream 343429 6165760 ~ 6170544 (+)
G141011 NA non-coding downstream 374832 6197163 ~ 6199521 (+)
G140862 NA other upstream 101045 5712612 ~ 5712702 (+)
CI01000027_05071693_05072917 NA other upstream 748674 5071693 ~ 5073136 (+)
CI01000027_05069310_05070638 NA other upstream 750942 5067917 ~ 5070868 (+)
CI01000027_05050310_05055447 NA other upstream 765871 5050310 ~ 5055755 (+)
G140924 NA other downstream 140875 5963206 ~ 5965326 (+)
G141052 NA other downstream 449036 6271367 ~ 6271600 (+)
CI01000027_06706050_06708485 NA other downstream 884046 6705983 ~ 6708513 (+)
G141082 NA other downstream 1076080 6898411 ~ 6900923 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other downstream 1130615 6951132 ~ 6957767 (+)

Expression


Co-expression Network