G140924


Basic Information

Item Value
gene id G140924
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 5963206 ~ 5965326 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU160143
ACTAAAACAAGCAAAGACAGGTTTACATACTTTATAACTAAAACTTAGTAATACAGTACATATGACCAAATGTCACTCCAATTTTGTAATGAATGTACATACTTTAGACTGCAATGAAAACAAACTCATTGCAAGAGACACCAAAGCAGTTGCACCCACCGCCCAGAGCACTGCCTCTGCTGAATAGTACCTGAAAAGTAATGACAGTTTCTTACTATAACACTGGCTACTAAAGTTTTTCAGTTATTGAAGTTTTTTTGAGTAATTGAAGGTCATTTAAATCTGTTTCAATGATGCTTTTTACTCACACTACCACTGATCCAAGGAGAAGGCCCTCTGTAATTGTCTGTGTGAGAAAACAGCACTTAGCATTGAAAAAATTGTCATTTAATGTCCACCACAAACAGTGGTTCTGTGATTTACTTACAAACAGCCCTAGGAAGATGAAGTTTAAGGGAACTTTCCGACGTATGTCACCAGAACAGATGAGCACAATGGTTAGAACAACTGTTACACCCCTTTTGAAATTTAAGCAAACAAAAGACGTCAGTGTAACATATATTAAGTTGGACACAATATATGCATATTATTTAGGACATGCAGAACACAGAAAAGAGAAGTGCTCACATCATAGTGTAGGTAAACCAAGAAGTGCGTTTCACCCAGTCACTGAGTGTCTCCCAAAAAAGAAAAGCACAGATGATTCCAACAGTTATTATTAGTTGAACCAAAAGTGTCAAGTACACTTTTCTTATGAAACCTCTTCTTATGACTGCATCTGAAAAGCAGTTCTCGTTCTCAAAGCCCAGGGTGTACTCTGGGGGAGCGCTGTCTGGAATCCCCATATTGACATGTTCAACAACGGGGGGCATCATGCCAGCGGTGGGCTGCCCAGCATTGCCCTGCGTTGCATTAGGATATTGCGGAGGGTAATAGGGATTGTACGGAGGGGGAGACTGCTCTGTGTTCATTCTGTGTCTCTCAATAAACCTTTTAGTGTGGCACCACTCTGCTTCCTGTTATGAGTTGTGCAGGGCAAAGTCTGATCTCAATCAGTTTGTCTCCTGGGGGACAGGACTTTGCCTAGCCCATCAGATCAATACACATTCATGAGAGCCAAGTTCACGTGTGTGTGATTTTTTTTAAATTCAACAATGAATGAAAGATATTTCACAATGAAATTTACAATTTGATGTAATGTAGGTACCTCTACTGAGTGCTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160143 True 1223 TUCP 0.40 4 5963206 5965326

Neighbor

gene id symbol gene type direction distance location
CI01000027_05931114_05936800 MYLIPB coding upstream 26249 5931114 ~ 5936957 (+)
CI01000027_05882855_05906234 JARID2A coding upstream 56972 5882855 ~ 5906234 (+)
CI01000027_05836494_05847115 NA coding upstream 115605 5836494 ~ 5847601 (+)
CI01000027_05820700_05833750 DYNC1I1 coding upstream 128965 5820467 ~ 5834241 (+)
CI01000027_05807381_05817636 TBC1D31 coding upstream 145541 5807029 ~ 5817665 (+)
CI01000027_05981521_05983935 ZHX2, ZHX2A coding downstream 16030 5981356 ~ 5984703 (+)
CI01000027_05994575_05998236 NSMCE2 coding downstream 29249 5994575 ~ 5998353 (+)
CI01000027_06042239_06051165 CBLC coding downstream 75587 6040913 ~ 6051619 (+)
CI01000027_06103946_06107995 TRYPSASE, TRP-IA, PRSS59.1, PRSS59.2, TRYP, TRP-II, TRP-I coding downstream 138563 6103889 ~ 6107995 (+)
CI01000027_06108585_06112721 NA coding downstream 143259 6108585 ~ 6112755 (+)
G140893 NA non-coding upstream 3298 5958289 ~ 5959908 (+)
G140869 NA non-coding upstream 52057 5906796 ~ 5911149 (+)
G140950 NA non-coding upstream 140875 5821810 ~ 5822331 (+)
G140894 NA non-coding upstream 209831 5750231 ~ 5753375 (+)
G140858 NA non-coding upstream 281747 5619656 ~ 5681459 (+)
G140875 NA non-coding downstream 48363 6013689 ~ 6017411 (+)
G140889 NA non-coding downstream 200434 6165760 ~ 6170544 (+)
G141011 NA non-coding downstream 231837 6197163 ~ 6199521 (+)
G141023 NA non-coding downstream 256407 6221733 ~ 6223809 (+)
G141029 NA non-coding downstream 274430 6239756 ~ 6239955 (+)
CI01000027_05757143_05758496 NA other upstream 204336 5756982 ~ 5758881 (+)
G140862 NA other upstream 242441 5712612 ~ 5712702 (+)
CI01000027_05071693_05072917 NA other upstream 890070 5071693 ~ 5073136 (+)
CI01000027_05069310_05070638 NA other upstream 892338 5067917 ~ 5070868 (+)
CI01000027_05050310_05055447 NA other upstream 907267 5050310 ~ 5055755 (+)
G141052 NA other downstream 306041 6271367 ~ 6271600 (+)
CI01000027_06706050_06708485 NA other downstream 741051 6705983 ~ 6708513 (+)
G141082 NA other downstream 933085 6898411 ~ 6900923 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other downstream 987620 6951132 ~ 6957767 (+)
CI01000027_07469157_07471720 NA other downstream 1503418 7468964 ~ 7471999 (+)

Expression


Co-expression Network