G141037


Basic Information

Item Value
gene id G141037
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 6299330 ~ 6299758 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU160276
CACAGAGTTTTCATCTGGTGTCTCAAGCTTCACTTCCTCCTTCACAATCAAGGCAGACTCTCTCTGCAGCACTTCATAAATGCCAGGCTCAGTTTTGATCTGAAAACTGGGTGGGTTTAAGGGGACACAGTCTGGTTCTGTCTTTGGAATGAATGCTCTGAAAGCAGGAGGATGAGGCTGTTGCTTCTGTTGTTGGTGTTGTTCAGATGACACAGTTAGGACTCCCAAAGCCTCCAGCTCTTCTTGTTCTGTTCTCATCTGTGTGACCTCGGGACAGGCGTCCATAACACAGTCCTGAGTGTTATTAGATGTTTTGGTTTTATCCATGTCGATACTGATGTCATCACTATTTGATGGCAACGGCTCTTCATCAACATTTTGCAGCTGTTTGGTTATTTTCTTTTTTTTCTTTAACATGTTAGCTTTCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160276 True 429 lncRNA 0.43 1 6299330 6299758

Neighbor

gene id symbol gene type direction distance location
CI01000027_06108585_06112721 NA coding upstream 186575 6108585 ~ 6112755 (+)
CI01000027_06103946_06107995 TRYPSASE, TRP-IA, PRSS59.1, PRSS59.2, TRYP, TRP-II, TRP-I coding upstream 191335 6103889 ~ 6107995 (+)
CI01000027_06042239_06051165 CBLC coding upstream 247711 6040913 ~ 6051619 (+)
CI01000027_05994575_05998236 NSMCE2 coding upstream 300977 5994575 ~ 5998353 (+)
CI01000027_05981521_05983935 ZHX2, ZHX2A coding upstream 314627 5981356 ~ 5984703 (+)
CI01000027_06327905_06328111 NA coding downstream 28147 6327905 ~ 6328220 (+)
CI01000027_06329025_06333271 NA coding downstream 28961 6328719 ~ 6333336 (+)
CI01000027_06335278_06348176 NA coding downstream 35402 6335160 ~ 6348853 (+)
CI01000027_06392269_06407773 PTPN3 coding downstream 92000 6391758 ~ 6407840 (+)
CI01000027_06410011_06426230 EPB41L4B coding downstream 110253 6410011 ~ 6426936 (+)
G141060 NA non-coding upstream 752 6298353 ~ 6298578 (+)
G141059 NA non-coding upstream 3913 6293996 ~ 6295417 (+)
G141051 NA non-coding upstream 29272 6269782 ~ 6270058 (+)
G141048 NA non-coding upstream 49260 6249828 ~ 6250070 (+)
G141029 NA non-coding upstream 59375 6239756 ~ 6239955 (+)
G141044 NA non-coding downstream 556 6300314 ~ 6300583 (+)
G141032 NA non-coding downstream 1242 6301000 ~ 6302784 (+)
G141038 NA non-coding downstream 23070 6322828 ~ 6325344 (+)
G141117 NA non-coding downstream 51341 6351099 ~ 6354786 (+)
G141093 NA non-coding downstream 108791 6408549 ~ 6408804 (+)
G141052 NA other upstream 27730 6271367 ~ 6271600 (+)
G140924 NA other upstream 334004 5963206 ~ 5965326 (+)
CI01000027_05757143_05758496 NA other upstream 540460 5756982 ~ 5758881 (+)
G140862 NA other upstream 578565 5712612 ~ 5712702 (+)
CI01000027_05071693_05072917 NA other upstream 1226194 5071693 ~ 5073136 (+)
CI01000027_06706050_06708485 NA other downstream 406619 6705983 ~ 6708513 (+)
G141082 NA other downstream 598653 6898411 ~ 6900923 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other downstream 653188 6951132 ~ 6957767 (+)
CI01000027_07469157_07471720 NA other downstream 1168986 7468964 ~ 7471999 (+)
CI01000027_07947743_07951397 NA other downstream 1650945 7947657 ~ 7951942 (+)

Expression


Co-expression Network