Gene
RNA
| Item | Value |
|---|---|
| gene id | G141032 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000027 |
| NCBI id | null |
| chromosome length | 10680226 |
| location | 6301000 ~ 6302784 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU160271 | False | 1785 | lncRNA | 0.34 | 1 | 6301000 | 6302784 |
| TU160270 | True | 1758 | lncRNA | 0.34 | 1 | 6301027 | 6302784 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000027_06108585_06112721 | NA | coding | upstream | 188245 | 6108585 ~ 6112755 (+) |
| CI01000027_06103946_06107995 | TRYPSASE, TRP-IA, PRSS59.1, PRSS59.2, TRYP, TRP-II, TRP-I | coding | upstream | 193005 | 6103889 ~ 6107995 (+) |
| CI01000027_06042239_06051165 | CBLC | coding | upstream | 249381 | 6040913 ~ 6051619 (+) |
| CI01000027_05994575_05998236 | NSMCE2 | coding | upstream | 302647 | 5994575 ~ 5998353 (+) |
| CI01000027_05981521_05983935 | ZHX2, ZHX2A | coding | upstream | 316297 | 5981356 ~ 5984703 (+) |
| CI01000027_06327905_06328111 | NA | coding | downstream | 25121 | 6327905 ~ 6328220 (+) |
| CI01000027_06329025_06333271 | NA | coding | downstream | 25935 | 6328719 ~ 6333336 (+) |
| CI01000027_06335278_06348176 | NA | coding | downstream | 32376 | 6335160 ~ 6348853 (+) |
| CI01000027_06392269_06407773 | PTPN3 | coding | downstream | 88974 | 6391758 ~ 6407840 (+) |
| CI01000027_06410011_06426230 | EPB41L4B | coding | downstream | 107227 | 6410011 ~ 6426936 (+) |
| G141044 | NA | non-coding | upstream | 417 | 6300314 ~ 6300583 (+) |
| G141037 | NA | non-coding | upstream | 1242 | 6299330 ~ 6299758 (+) |
| G141060 | NA | non-coding | upstream | 2422 | 6298353 ~ 6298578 (+) |
| G141059 | NA | non-coding | upstream | 5583 | 6293996 ~ 6295417 (+) |
| G141051 | NA | non-coding | upstream | 30942 | 6269782 ~ 6270058 (+) |
| G141038 | NA | non-coding | downstream | 20044 | 6322828 ~ 6325344 (+) |
| G141117 | NA | non-coding | downstream | 48315 | 6351099 ~ 6354786 (+) |
| G141093 | NA | non-coding | downstream | 105765 | 6408549 ~ 6408804 (+) |
| G141080 | NA | non-coding | downstream | 106154 | 6408938 ~ 6409292 (+) |
| G141114 | NA | non-coding | downstream | 135141 | 6437925 ~ 6440544 (+) |
| G141052 | NA | other | upstream | 29400 | 6271367 ~ 6271600 (+) |
| G140924 | NA | other | upstream | 335674 | 5963206 ~ 5965326 (+) |
| CI01000027_05757143_05758496 | NA | other | upstream | 542130 | 5756982 ~ 5758881 (+) |
| G140862 | NA | other | upstream | 580235 | 5712612 ~ 5712702 (+) |
| CI01000027_05071693_05072917 | NA | other | upstream | 1227864 | 5071693 ~ 5073136 (+) |
| CI01000027_06706050_06708485 | NA | other | downstream | 403593 | 6705983 ~ 6708513 (+) |
| G141082 | NA | other | downstream | 595627 | 6898411 ~ 6900923 (+) |
| CI01000027_06951132_06956691 | GLIPR2, GLIPR2L | other | downstream | 650162 | 6951132 ~ 6957767 (+) |
| CI01000027_07469157_07471720 | NA | other | downstream | 1165960 | 7468964 ~ 7471999 (+) |
| CI01000027_07947743_07951397 | NA | other | downstream | 1647919 | 7947657 ~ 7951942 (+) |
