G141038


Basic Information

Item Value
gene id G141038
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 6322828 ~ 6325344 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU160277
AAAAACATATAAATAGTTGTCAACTATCGCTGCTGCATGATTTGCCAGCCTGGGTGCCCCTGAAGCGTTTGACTGGCCAAGCTGCTGCCATTCATCTTGCTGTGCACGGTACACCCAGACATCACTAGCCAATGAGTGGTTGGCAAGCTCACCACCATAGATGACCATGTTGCCTTGCCATTCTACTGCTGTGTGGGAATGTCGAGGAGCTGGACTATATGAATGTGACATCTGTTCCCAATTATTGGTCGAAAAATTGTAAACAACAAGGTCCCCTAGTGCTCTGTTCAGATCAAACCCTCCAAACATGTACATAGCTCCTGCGGAAGCCAGGTAAACTCCAGCAGAGGCGGTGCGAGGGGCTGCTTTAACATCACCAGGGCTCACCTCCCACCACTGCCCTGCCCCACTGTTGTCACGGAGACCCAGCTGACAGTTTTGTCCCACAAAGCCAGTGCTGCAGATACAATGCTCACCCCTCTTATCACAGCGACCGTGGCCATGTTGTGTGCAGACCTGGGAGCAGAGAGGGGTACTGCAGTCCACTCCTCCCCACCCCTGATGGCACTGACAGCGGGCAGTAGCTACGTCACAGCGCCCATGACCACCGCAGTCCCCAGGGCAAACCGAAAAAGTGTAGGTGGCATTGAAACCCAGCAGGTTGTAGTTAGCATCACTGAAGAGGTGGAGCAGCATCTTACCAGACTTGGCTTCAATTGGTTGTGGTAAGGTGTTGCCACTTAAACTTGCCAGTAGGGTGCTCTGGTAGGAATCTCCATCGTAGACAAACAGATAGTCATAGGTGCACTCCGTCTCCATAAACGTAAAGTTAAGCACAATGCGATGGTTTCTGCTGGGAGCCTTAATGAGCCACTCGCAGTTCCCATTCACAGAGTAGTTTCCCGGCCCATCTGTGACATATCCTGGGACACCCCGGAGAACCTGTCTTTGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160277 True 953 lncRNA 0.52 6 6322828 6325344

Neighbor

gene id symbol gene type direction distance location
CI01000027_06108585_06112721 NA coding upstream 210073 6108585 ~ 6112755 (+)
CI01000027_06103946_06107995 TRYPSASE, TRP-IA, PRSS59.1, PRSS59.2, TRYP, TRP-II, TRP-I coding upstream 214833 6103889 ~ 6107995 (+)
CI01000027_06042239_06051165 CBLC coding upstream 271209 6040913 ~ 6051619 (+)
CI01000027_05994575_05998236 NSMCE2 coding upstream 324475 5994575 ~ 5998353 (+)
CI01000027_05981521_05983935 ZHX2, ZHX2A coding upstream 338125 5981356 ~ 5984703 (+)
CI01000027_06327905_06328111 NA coding downstream 2561 6327905 ~ 6328220 (+)
CI01000027_06329025_06333271 NA coding downstream 3375 6328719 ~ 6333336 (+)
CI01000027_06335278_06348176 NA coding downstream 9816 6335160 ~ 6348853 (+)
CI01000027_06392269_06407773 PTPN3 coding downstream 66414 6391758 ~ 6407840 (+)
CI01000027_06410011_06426230 EPB41L4B coding downstream 84667 6410011 ~ 6426936 (+)
G141032 NA non-coding upstream 20044 6301000 ~ 6302784 (+)
G141044 NA non-coding upstream 22245 6300314 ~ 6300583 (+)
G141037 NA non-coding upstream 23070 6299330 ~ 6299758 (+)
G141060 NA non-coding upstream 24250 6298353 ~ 6298578 (+)
G141059 NA non-coding upstream 27411 6293996 ~ 6295417 (+)
G141117 NA non-coding downstream 25755 6351099 ~ 6354786 (+)
G141093 NA non-coding downstream 83205 6408549 ~ 6408804 (+)
G141080 NA non-coding downstream 83594 6408938 ~ 6409292 (+)
G141114 NA non-coding downstream 112581 6437925 ~ 6440544 (+)
G141113 NA non-coding downstream 118950 6444294 ~ 6445548 (+)
G141052 NA other upstream 51228 6271367 ~ 6271600 (+)
G140924 NA other upstream 357502 5963206 ~ 5965326 (+)
CI01000027_05757143_05758496 NA other upstream 563958 5756982 ~ 5758881 (+)
G140862 NA other upstream 602063 5712612 ~ 5712702 (+)
CI01000027_05071693_05072917 NA other upstream 1249692 5071693 ~ 5073136 (+)
CI01000027_06706050_06708485 NA other downstream 381033 6705983 ~ 6708513 (+)
G141082 NA other downstream 573067 6898411 ~ 6900923 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other downstream 627602 6951132 ~ 6957767 (+)
CI01000027_07469157_07471720 NA other downstream 1143400 7468964 ~ 7471999 (+)
CI01000027_07947743_07951397 NA other downstream 1625359 7947657 ~ 7951942 (+)

Expression


Co-expression Network