XLOC_008602



Basic Information


Item Value
gene id XLOC_008602
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 30580518 ~ 30580827 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00018781
TACTTGATTTGAACGATCCCTTAACCCTAACTATTATACTTTACTGTAACCCATCCTGAACCCCTTACCACAAATCAGGCAGATTGTAGAGCGATAAGTGTGCTATTACTACTCTAAGCAATCCAACTTTTTTTTCAGGAGGACAATGAAAATGatgaaaagacttgcaactcaGCCAGAATATCGTAGCAACCACATACAATACTGTTTAAAGCAAGCAAGAATTCTTTAATTTCCTTTCAAATgagttatttttacatttacaaatgtacattttacatCATCACCCCTGTTCAAAAATATCCAGTTT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00018781 True 310 lncRNA 0.34 1 30580518 30580827

Neighbor


gene id symbol gene type direction distance location
XLOC_008601 BX649247.1 coding upstream 125952 30454452 ~ 30454566 (+)
XLOC_008600 NA coding upstream 200199 30358431 ~ 30380319 (+)
XLOC_008599 mrps23 coding upstream 225732 30350061 ~ 30354786 (+)
XLOC_008598 nos2b coding upstream 231841 30323491 ~ 30348677 (+)
XLOC_008597 lyrm9 coding upstream 268565 30310843 ~ 30311953 (+)
XLOC_008603 NA coding downstream 280935 30861762 ~ 30874490 (+)
XLOC_008604 BX000438.3 coding downstream 312410 30893237 ~ 30893355 (+)
XLOC_008605 BX000438.1 coding downstream 315895 30896722 ~ 30910178 (+)
XLOC_008606 omgb coding downstream 336455 30917282 ~ 30921559 (+)
XLOC_008607 BX000438.2 coding downstream 342099 30922926 ~ 30924032 (+)
XLOC_008463 BX663520.1 misc upstream 9328236 21252191 ~ 21252282 (+)
XLOC_008594 NA non-coding upstream 626423 29947508 ~ 29954095 (+)
XLOC_008593 dre-mir-125c non-coding upstream 779466 29800968 ~ 29801052 (+)
XLOC_008592 dre-let-7c-1 non-coding upstream 784589 29795823 ~ 29795929 (+)
XLOC_008609 NA non-coding downstream 601913 31182740 ~ 31187391 (+)

Expression



Co-expression Network