G141197


Basic Information

Item Value
gene id G141197
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 6778215 ~ 6778496 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU160447
AAGAAAAGTAAAATGACATTTGTTTATCCACTCCTAGAAACTGCCCTTTTCTGCTAAGTAGTTTAGTATAGTCACAGCACATACATGGGCATACGAACATATAAAATTACACTTCACACTTAATTATTATTATTATTTTTTTAAATACCGTCTTTGAGGATTTCACTCACATCCAGGTCATTGCTTGTGTAATCAACATACATAAGTACAAACGCCCACTCACAAACACGAGCAAAACTAACAAATAGTTTTTACCACACATGACCTTTAAGCTTGTCAACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160447 True 282 lncRNA 0.34 1 6778215 6778496

Neighbor

gene id symbol gene type direction distance location
CI01000027_06706050_06708485 NA coding upstream 69702 6705983 ~ 6708513 (+)
CI01000027_06604099_06652019 GALNT1 coding upstream 126027 6604099 ~ 6652188 (+)
CI01000027_06504915_06514535 NA coding upstream 263065 6504311 ~ 6515150 (+)
CI01000027_06495825_06497691 GEM coding upstream 280137 6495351 ~ 6498078 (+)
CI01000027_06477695_06489968 RAD54B coding upstream 288182 6477695 ~ 6490033 (+)
CI01000027_06785671_06803146 NR4A3 coding downstream 7175 6785671 ~ 6803213 (+)
CI01000027_06811768_06817052 NA coding downstream 32598 6811094 ~ 6817163 (+)
CI01000027_06859191_06877582 NA coding downstream 80695 6859191 ~ 6877625 (+)
CI01000027_06906104_06909909 NA coding downstream 127608 6906104 ~ 6910164 (+)
CI01000027_06915303_06927001 TMEM67 coding downstream 136807 6915303 ~ 6927308 (+)
G141187 NA non-coding upstream 13659 6764348 ~ 6764556 (+)
G141183 NA non-coding upstream 22352 6755577 ~ 6755863 (+)
G141182 NA non-coding upstream 24107 6753896 ~ 6754108 (+)
G141177 NA non-coding upstream 36016 6741970 ~ 6742199 (+)
G141170 NA non-coding upstream 47482 6730474 ~ 6730733 (+)
G141198 NA non-coding downstream 1189 6779685 ~ 6780482 (+)
G141209 NA non-coding downstream 92485 6870981 ~ 6871218 (+)
G141211 NA non-coding downstream 100509 6879005 ~ 6879349 (+)
G141089 NA non-coding downstream 134000 6912496 ~ 6915184 (+)
G141220 NA non-coding downstream 193620 6972116 ~ 6972331 (+)
G141052 NA other upstream 506615 6271367 ~ 6271600 (+)
G140924 NA other upstream 812889 5963206 ~ 5965326 (+)
CI01000027_05757143_05758496 NA other upstream 1019345 5756982 ~ 5758881 (+)
G140862 NA other upstream 1057450 5712612 ~ 5712702 (+)
G141082 NA other downstream 119915 6898411 ~ 6900923 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other downstream 174450 6951132 ~ 6957767 (+)
CI01000027_07469157_07471720 NA other downstream 690248 7468964 ~ 7471999 (+)
CI01000027_07947743_07951397 NA other downstream 1172207 7947657 ~ 7951942 (+)
CI01000027_08026500_08029412 ENSAB, ENSA other downstream 1247901 8025788 ~ 8032041 (+)

Expression


Co-expression Network