G141209


Basic Information

Item Value
gene id G141209
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 6870981 ~ 6871218 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU160463
GGGATGCAATAAATGTATCAAAATTGAGAGAATTTTTTGTAACACTATAAATGTCTTTACTATTTCAAATAAATGCGATCTATTTGTCAAAAAATTCCTGAAACAATGTATCATGATTTCCCCCCCAAAAAATATTAAGTAGCTGTTTTCAACATTGATAATAATAAGAAATCAGCATATTAGAATGATTTCTGAATGATCATGTGACACTGAAGACTGGAGTACTACAAACCACGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160463 True 238 lncRNA 0.30 1 6870981 6871218

Neighbor

gene id symbol gene type direction distance location
CI01000027_06811768_06817052 NA coding upstream 53818 6811094 ~ 6817163 (+)
CI01000027_06785671_06803146 NR4A3 coding upstream 67768 6785671 ~ 6803213 (+)
CI01000027_06706050_06708485 NA coding upstream 162468 6705983 ~ 6708513 (+)
CI01000027_06604099_06652019 GALNT1 coding upstream 218793 6604099 ~ 6652188 (+)
CI01000027_06504915_06514535 NA coding upstream 355831 6504311 ~ 6515150 (+)
CI01000027_06906104_06909909 NA coding downstream 34886 6906104 ~ 6910164 (+)
CI01000027_06915303_06927001 TMEM67 coding downstream 44085 6915303 ~ 6927308 (+)
CI01000027_06947553_06950983 NA coding downstream 75043 6946261 ~ 6950983 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L coding downstream 79914 6951132 ~ 6957767 (+)
CI01000027_07055665_07057014 NA coding downstream 183899 7055117 ~ 7057254 (+)
G141198 NA non-coding upstream 90499 6779685 ~ 6780482 (+)
G141197 NA non-coding upstream 92485 6778215 ~ 6778496 (+)
G141187 NA non-coding upstream 106425 6764348 ~ 6764556 (+)
G141183 NA non-coding upstream 115118 6755577 ~ 6755863 (+)
G141182 NA non-coding upstream 116873 6753896 ~ 6754108 (+)
G141211 NA non-coding downstream 7787 6879005 ~ 6879349 (+)
G141089 NA non-coding downstream 41278 6912496 ~ 6915184 (+)
G141220 NA non-coding downstream 100898 6972116 ~ 6972331 (+)
G141221 NA non-coding downstream 102042 6973260 ~ 6973484 (+)
G141096 NA non-coding downstream 107505 6978723 ~ 6980471 (+)
G141052 NA other upstream 599381 6271367 ~ 6271600 (+)
G140924 NA other upstream 905655 5963206 ~ 5965326 (+)
CI01000027_05757143_05758496 NA other upstream 1112111 5756982 ~ 5758881 (+)
G140862 NA other upstream 1150216 5712612 ~ 5712702 (+)
G141082 NA other downstream 27193 6898411 ~ 6900923 (+)
CI01000027_07469157_07471720 NA other downstream 597526 7468964 ~ 7471999 (+)
CI01000027_07947743_07951397 NA other downstream 1079485 7947657 ~ 7951942 (+)
CI01000027_08026500_08029412 ENSAB, ENSA other downstream 1155179 8025788 ~ 8032041 (+)

Expression


Co-expression Network