XLOC_008604 (BX000438.3)


Basic Information

Item Value
gene id XLOC_008604
gene name BX000438.3
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 30893237 ~ 30893355 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017187
TGTGATTCAGCCATATcaacctgcagcccaagactggttactcactgaagccaagcagggctgagcctggtcagtacctggatgggagactacatgggaagaccaggttgctgtcggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000100212

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017187 True 119 rRNA 0.54 1 30893237 30893355

Neighbor

gene id symbol gene type direction distance location
XLOC_008603 NA coding upstream 18747 30861762 ~ 30874490 (+)
XLOC_008602 NA coding upstream 312410 30580518 ~ 30580827 (+)
XLOC_008601 BX649247.1 coding upstream 438671 30454452 ~ 30454566 (+)
XLOC_008600 NA coding upstream 512918 30358431 ~ 30380319 (+)
XLOC_008599 mrps23 coding upstream 538451 30350061 ~ 30354786 (+)
XLOC_008605 BX000438.1 coding downstream 3367 30896722 ~ 30910178 (+)
XLOC_008606 omgb coding downstream 23927 30917282 ~ 30921559 (+)
XLOC_008607 BX000438.2 coding downstream 29571 30922926 ~ 30924032 (+)
XLOC_008608 pimr135 coding downstream 120223 31013578 ~ 31018413 (+)
XLOC_008609 NA coding downstream 289385 31182740 ~ 31187391 (+)
XLOC_008463 BX663520.1 misc upstream 9640955 21252191 ~ 21252282 (+)
XLOC_008594 NA non-coding upstream 939142 29947508 ~ 29954095 (+)
XLOC_008620 NA non-coding downstream 554230 31447585 ~ 31457948 (+)
XLOC_008623 NA non-coding downstream 577005 31470360 ~ 31470945 (+)

Expression


Co-expression Network