G141321


Basic Information

Item Value
gene id G141321
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 7305684 ~ 7329095 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU160594
ATAAATCTGTAATAGTTTAAGAGAGAATTTAAACACTATATATTAAAATAATTTGAAAAAAAAGTGGATAAAATTAAATATCTAATTTGGTTTAAAATTGACAGTAAATTATATAGCCAATATATCATGTATCCATATATATATTATATGTAGCTAGTGATGGCTGGTCATTATGTGTGGAGAATTTCAGATGGTTTTGCGGTCTAATTTTTGGTGGCAGTTTGACTGATTTCCTAAAAGTTTTTGTCTTTAAAAAAAAAAAAAAAAAATATATATATATATATATATATATTAAAATAGGAAAATGTTCTTTTAAATTGTAGTAATATTTCACAATATTACTGTTTTTACTGTGTTTTCGACCAAATAAATGCAGCCTTGGTGAGTATAATTTTTTTTTTTTTTTGTTAACTTTCTACATGATTTTGTTTACTGGTCTGAAATGATAAACCTTTGAATTAGCACACCGACTGTGATGATCTTATGAGTAATTTATGGAATTATTAATATATATATTTTTTATTTATAATTTCAATGTTAGTAGTTGTGAATATTTAAGGGATCATTTGACCAAAGCCTCTTGTTGGACATAAAGTATTTGTGTTTTGTCAATGGTCAGCTAAGGAGCGGCCATGTTCTGCAGCGCTCAGTCCTGAGAGGAAGTCTGTTTAGACAGGTTTACAAAAGAATGCACTACAACCCCATGCTGGGCACCAAACGACAGTGGAGGAATAGGGCAATTTTATTATTTAAACTTTGAAGTAACAACCCTCCAGGAGGGACTGTGGAATGACACTATGATTCTCTGCATGAGAGAGAAGAATAACACAGACAAACGCTCACCCTTTATTTATTCTGATCCTGATGGTTCACTAAAATAAACACTTTTGTTCTTCA
>TU160593
TGGGTAACATAAGCTGCTTGAAAAGTATAGAAGTAATAGCAGAAGTATAGTAAGCTGCTTTCAGGAAGTTTGAAGATCCTCAAAATTCAGATCTGAAAACTTAAAGTTCAAGAGATCATCTCTCAACTTCTTCACCTGCCTATTGGCTACTTTTGCTTTTGNNNNNNNNNNNNNNNNTTTTTTGTTAACTTTCTACATGATTTTGTTTACTGGTCTGAAATGATAAACCTTTGAATTAGCACACCGACTGTGATGATCTTATGAGTAATTTATGGAATTATTAATATATATATTTTTTATTTATAATTTCAATGTTAGTAGTTGTGAATATTTAAGGGATCATTTGACCAAAGCCTCTTGTTGGACATAAAGTATTTGTGTTTTGTCAATGGTCAGCTAAGGAGCGGCCATGTTCTGCAGCGCTCAGTCCTGAGAGGAAGTCTGTTTAGACAGGTTTACAAAAGAATGCACTACAACCCCATGCTGGGCACCAAACGACAGTGGAGGAATAGGGCAATTTTATTATTTAAACTTTGAAGTAACAACCCTCCAGGAGGGACTGTGGAATGACACTATGATTCTCTGCATGAGAGAGAAGAATAACACAGACAAACGCTCACCCTTTATTTATTCTGATCCTGATGGTTCACTAAAATAAACACTTTTGTTCTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160594 False 897 lncRNA 0.30 3 7305684 7329095
TU160593 True 674 lncRNA 0.35 2 7327001 7329095

Neighbor

gene id symbol gene type direction distance location
CI01000027_07216718_07225808 NA coding upstream 79113 7215768 ~ 7226571 (+)
CI01000027_07142789_07157141 NA coding upstream 147697 7142315 ~ 7157987 (+)
CI01000027_07055665_07057014 NA coding upstream 248430 7055117 ~ 7057254 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L coding upstream 348842 6951132 ~ 6957767 (+)
CI01000027_06947553_06950983 NA coding upstream 354701 6946261 ~ 6950983 (+)
CI01000027_07375781_07378401 ITGA8 coding downstream 46686 7375781 ~ 7378421 (+)
CI01000027_07432479_07451012 FAM171A1 coding downstream 103384 7432479 ~ 7452012 (+)
CI01000027_07455850_07459062 NMT2, NMT1 coding downstream 126755 7455850 ~ 7459062 (+)
CI01000027_07469157_07471720 NA coding downstream 139869 7468964 ~ 7471999 (+)
CI01000027_07529488_07537870 DCST2 coding downstream 200393 7529488 ~ 7539111 (+)
G141255 NA non-coding upstream 110190 7195275 ~ 7195494 (+)
G141254 NA non-coding upstream 112057 7193425 ~ 7193627 (+)
G141110 NA non-coding upstream 114517 7187529 ~ 7191167 (+)
G141096 NA non-coding upstream 325213 6978723 ~ 6980471 (+)
G141221 NA non-coding upstream 332200 6973260 ~ 6973484 (+)
G141354 NA non-coding downstream 4327 7333422 ~ 7333632 (+)
G141355 NA non-coding downstream 4814 7333909 ~ 7334137 (+)
G141364 NA non-coding downstream 172062 7501157 ~ 7501487 (+)
G141330 NA non-coding downstream 172971 7502066 ~ 7514879 (+)
G141378 NA non-coding downstream 200704 7529799 ~ 7530002 (+)
G141082 NA other upstream 404761 6898411 ~ 6900923 (+)
CI01000027_06706050_06708485 NA other upstream 595052 6705983 ~ 6708513 (+)
G141052 NA other upstream 1034084 6271367 ~ 6271600 (+)
G140924 NA other upstream 1340358 5963206 ~ 5965326 (+)
CI01000027_07947743_07951397 NA other downstream 621608 7947657 ~ 7951942 (+)
CI01000027_08026500_08029412 ENSAB, ENSA other downstream 697302 8025788 ~ 8032041 (+)
CI01000027_08255251_08264629 NA other downstream 929242 8255073 ~ 8264897 (+)
G143033 NA other downstream 2399720 9728815 ~ 9729551 (+)

Expression


Co-expression Network