G141354


Basic Information

Item Value
gene id G141354
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 7333422 ~ 7333632 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU160627
TTATAATCTGTGAAGTTCTAGTAAAGCACTGGTTAAACGTCTTAATATTTTTGCAAGACATTAACCCCCGGTTTCACAGGCTTAAGCTAGTCTTAGACTAAAATGCTTGTTTGAGCTGTTTTAACTGAAAGTAACTTGTACATCTTAAAATATGTCATTGTTTTGTCTCAAGATGCACACCTGTAATGTTTTTTATAAAAGCTACTTAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160627 True 211 lncRNA 0.32 1 7333422 7333632

Neighbor

gene id symbol gene type direction distance location
CI01000027_07292677_07331000 FAM188A coding upstream 2390 7292677 ~ 7331032 (+)
CI01000027_07216718_07225808 NA coding upstream 106851 7215768 ~ 7226571 (+)
CI01000027_07142789_07157141 NA coding upstream 175435 7142315 ~ 7157987 (+)
CI01000027_07055665_07057014 NA coding upstream 276168 7055117 ~ 7057254 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L coding upstream 376580 6951132 ~ 6957767 (+)
CI01000027_07375781_07378401 ITGA8 coding downstream 42149 7375781 ~ 7378421 (+)
CI01000027_07432479_07451012 FAM171A1 coding downstream 98847 7432479 ~ 7452012 (+)
CI01000027_07455850_07459062 NMT2, NMT1 coding downstream 122218 7455850 ~ 7459062 (+)
CI01000027_07469157_07471720 NA coding downstream 135332 7468964 ~ 7471999 (+)
CI01000027_07529488_07537870 DCST2 coding downstream 195856 7529488 ~ 7539111 (+)
G141321 NA non-coding upstream 4327 7305684 ~ 7329095 (+)
G141255 NA non-coding upstream 137928 7195275 ~ 7195494 (+)
G141254 NA non-coding upstream 139795 7193425 ~ 7193627 (+)
G141110 NA non-coding upstream 142255 7187529 ~ 7191167 (+)
G141096 NA non-coding upstream 352951 6978723 ~ 6980471 (+)
G141355 NA non-coding downstream 277 7333909 ~ 7334137 (+)
G141364 NA non-coding downstream 167525 7501157 ~ 7501487 (+)
G141330 NA non-coding downstream 168434 7502066 ~ 7514879 (+)
G141378 NA non-coding downstream 196167 7529799 ~ 7530002 (+)
G141380 NA non-coding downstream 202485 7536117 ~ 7536333 (+)
G141082 NA other upstream 432499 6898411 ~ 6900923 (+)
CI01000027_06706050_06708485 NA other upstream 622790 6705983 ~ 6708513 (+)
G141052 NA other upstream 1061822 6271367 ~ 6271600 (+)
G140924 NA other upstream 1368096 5963206 ~ 5965326 (+)
CI01000027_07947743_07951397 NA other downstream 617071 7947657 ~ 7951942 (+)
CI01000027_08026500_08029412 ENSAB, ENSA other downstream 692765 8025788 ~ 8032041 (+)
CI01000027_08255251_08264629 NA other downstream 924705 8255073 ~ 8264897 (+)
G143033 NA other downstream 2395183 9728815 ~ 9729551 (+)

Expression


Co-expression Network