G142289


Basic Information

Item Value
gene id G142289
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 7428257 ~ 7467522 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU161684
CATGATATTTGACAGCTTTATTCAATGACTCATTTTTTTAATATATATATATATATAAAACAAAGATTATGCTCACATCTTTAAGTCTCATCTGATTGGTAATGAGATATCAATGAGATTATCAGGTGGTATCACTACCAGGTGAATTATTTTTTAATCTGTTAATCTGTATTACATAAAAAAGATGAAATAAAAAACTACTTCATTGTTTAAATCTTGCAGCTTTTTAACAGTTTATTAACTTTAATAATATGTAAAACTAAGGAGATGTTTTTCCCCATCACAGTCCATACTTTTCAATGACTTCCTTGGCCAACGAAATGTACGCATTCATGGCATCCTCATTTGACATACCTGTACTTAAATGTGTATTTATCATTATGTTTCACATATTGTCACATGGTCACTATGGTATACTGGTCAAGCATAATTCATTTATTGTGCAACAAAAGTGTCCATTACTTAAAGGGATCCTTGATTTCACTTTTTTAACTTTAGTTAGAGTGTAATGTTGCTGTTTAAGCATAAACAACATCTGCAAAGTTACAACACTTAAAGTTCAATGCAAAGGGAGATATTTTCTTTTACAGAAATCGCTTTTTAAGGACTACAACAAGCTTCTTCCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161684 True 627 lncRNA 0.30 2 7428257 7467522

Neighbor

gene id symbol gene type direction distance location
CI01000027_07291684_07291971 NA coding downstream 136286 7290753 ~ 7291971 (-)
CI01000027_07280569_07290167 NA coding downstream 137767 7280215 ~ 7290490 (-)
CI01000027_07190301_07196617 NA coding downstream 231255 7190071 ~ 7197002 (-)
CI01000027_07022724_07029894 STEAP4 coding downstream 398229 7022108 ~ 7030028 (-)
CI01000027_06975907_06983141 NA coding downstream 444574 6975907 ~ 6983683 (-)
CI01000027_07473568_07489464 ABCB1, ABCB4 coding upstream 5377 7472899 ~ 7489775 (-)
CI01000027_07495449_07517906 ADAM15 coding upstream 27927 7495449 ~ 7517906 (-)
CI01000027_07520072_07528984 DCST1 coding upstream 51963 7519485 ~ 7528984 (-)
CI01000027_07564783_07576342 NA coding upstream 97070 7564592 ~ 7576800 (-)
CI01000027_07581095_07587079 SYT11B coding upstream 113271 7580793 ~ 7587079 (-)
G142254 NA non-coding downstream 42766 7360940 ~ 7385491 (-)
G142248 NA non-coding downstream 74019 7335871 ~ 7354238 (-)
G142182 NA non-coding downstream 99162 7326018 ~ 7329095 (-)
G142230 NA non-coding downstream 126552 7295372 ~ 7301705 (-)
G142223 NA non-coding downstream 245725 7182307 ~ 7182532 (-)
G142307 NA non-coding upstream 71949 7539471 ~ 7542955 (-)
G143304 NA non-coding upstream 307881 7775403 ~ 7775628 (-)
G143334 NA non-coding upstream 326186 7793708 ~ 7798644 (-)
G143341 NA non-coding upstream 336793 7804315 ~ 7804766 (-)
G143371 NA non-coding upstream 477326 7944848 ~ 7945079 (-)
G142209 NA other downstream 270259 7153623 ~ 7157998 (-)
G142203 NA other downstream 285194 7141094 ~ 7143063 (-)
G141638 NA other downstream 631550 6788627 ~ 6796707 (-)
CI01000027_05447458_05450346 PON2, PON3.2, PON3.1 other downstream 1977894 5447424 ~ 5450461 (-)
G141588 NA other downstream 2227102 5108335 ~ 5201155 (-)
G143267 NA other upstream 201807 7669329 ~ 7673769 (-)
G143325 NA other upstream 417013 7884535 ~ 7886049 (-)
G144365 NA other upstream 3071258 10538780 ~ 10542148 (-)

Expression


Co-expression Network