G141380


Basic Information

Item Value
gene id G141380
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 7536117 ~ 7536333 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU160654
GGACGGCAATTTGCAGGGAGGGTAGGATCAATGCTAGCAGGCTAACGTTAGCATTTCCCAGATTACCTACTGCACCTTTAAGTTTTATTGTGGAATTACAATTCCATTTCATTCATCAACTCCTCTATATCATCTATGATCCAGTCTTCCTTTTGTAGGAGTAGCGTATCAGTCTCTGTACCTCACGTCTAATATGACAGATGTCCTTTCTCTGTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160654 True 217 lncRNA 0.42 1 7536117 7536333

Neighbor

gene id symbol gene type direction distance location
CI01000027_07469157_07471720 NA coding upstream 64118 7468964 ~ 7471999 (+)
CI01000027_07455850_07459062 NMT2, NMT1 coding upstream 77055 7455850 ~ 7459062 (+)
CI01000027_07432479_07451012 FAM171A1 coding upstream 84105 7432479 ~ 7452012 (+)
CI01000027_07375781_07378401 ITGA8 coding upstream 157696 7375781 ~ 7378421 (+)
CI01000027_07292677_07331000 FAM188A coding upstream 205085 7292677 ~ 7331032 (+)
CI01000027_07541256_07541975 NA coding downstream 4923 7541256 ~ 7542152 (+)
CI01000027_07545610_07559939 NA coding downstream 9277 7545610 ~ 7560158 (+)
CI01000027_07561011_07562818 NA coding downstream 24558 7560891 ~ 7563845 (+)
CI01000027_07605090_07608785 NA coding downstream 68527 7604860 ~ 7609540 (+)
CI01000027_07618538_07623119 NA coding downstream 80952 7617285 ~ 7624255 (+)
G141378 NA non-coding upstream 6115 7529799 ~ 7530002 (+)
G141330 NA non-coding upstream 21238 7502066 ~ 7514879 (+)
G141364 NA non-coding upstream 34630 7501157 ~ 7501487 (+)
G141355 NA non-coding upstream 201980 7333909 ~ 7334137 (+)
G141354 NA non-coding upstream 202485 7333422 ~ 7333632 (+)
G142360 NA non-coding downstream 180787 7717120 ~ 7722230 (+)
CI01000027_07789066_07797594 NA non-coding downstream 248441 7784774 ~ 7800723 (+)
G142446 NA non-coding downstream 268209 7804542 ~ 7804806 (+)
G142452 NA non-coding downstream 277327 7813660 ~ 7828067 (+)
G142465 NA non-coding downstream 294659 7830992 ~ 7907635 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other upstream 578350 6951132 ~ 6957767 (+)
G141082 NA other upstream 635194 6898411 ~ 6900923 (+)
CI01000027_06706050_06708485 NA other upstream 825485 6705983 ~ 6708513 (+)
G141052 NA other upstream 1264517 6271367 ~ 6271600 (+)
CI01000027_07947743_07951397 NA other downstream 414370 7947657 ~ 7951942 (+)
CI01000027_08026500_08029412 ENSAB, ENSA other downstream 490064 8025788 ~ 8032041 (+)
CI01000027_08255251_08264629 NA other downstream 722004 8255073 ~ 8264897 (+)
G143033 NA other downstream 2192482 9728815 ~ 9729551 (+)

Expression


Co-expression Network