G143341


Basic Information

Item Value
gene id G143341
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 7804315 ~ 7804766 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU162867
GATATCACCATGAATATGCCACCGCTACATTTAAATTACATTACGGTGCCCACCGTGGCACCGCCTCCACTGTCGTTTTGCTTTTTTTTATAGAAATAAAAAACATTTAATTCAGTTGGATAACGGTCGCTTCAATTGTAAACTATTGTAAACATCTGCTCTGCTCATCCAGCACGAGCTGCAGAGTCGCACACAGTGCAGCAGGAATGACAGTTCATTGATCACGTGACGAGAGAAAGGCGAGATGACTGACAAGACCATGGCAGAGGATTCGTTGCACAACAGAGCCTAAACATCTGATAAATGTCTTATCTTGTAGAATGTGCACTCAGCACCGCCTCTCCCTATACACAGAGTATGTGCGATCACGAATTTGAAAGCAAAAGTAAAACGCAAGCTCCCTGATGCATGTAAAATATGTCTCTTAATTTCAAACCTATCTTAGGCTGGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU162867 True 452 lncRNA 0.43 1 7804315 7804766

Neighbor

gene id symbol gene type direction distance location
CI01000027_07709714_07744049 MEF2D coding downstream 60266 7708557 ~ 7744049 (-)
CI01000027_07692521_07693509 NA coding downstream 110707 7692521 ~ 7693608 (-)
CI01000027_07690842_07692012 NA coding downstream 112303 7690638 ~ 7692012 (-)
CI01000027_07665461_07665871 NA coding downstream 138444 7665302 ~ 7665871 (-)
CI01000027_07591755_07601032 NA coding downstream 203283 7590481 ~ 7601032 (-)
CI01000027_07821062_07827997 RHBG coding upstream 16296 7821062 ~ 7828092 (-)
CI01000027_07850115_07861432 BCAN coding upstream 44937 7849703 ~ 7861432 (-)
CI01000027_07876459_07878548 NA coding upstream 70727 7875493 ~ 7878548 (-)
CI01000027_07888504_07893711 TLR18 coding upstream 83738 7888504 ~ 7893711 (-)
CI01000027_07904624_07919811 NA coding upstream 99858 7904624 ~ 7919811 (-)
G143334 NA non-coding downstream 5671 7793708 ~ 7798644 (-)
G143304 NA non-coding downstream 28687 7775403 ~ 7775628 (-)
G142307 NA non-coding downstream 261360 7539471 ~ 7542955 (-)
G142289 NA non-coding downstream 336793 7428257 ~ 7467522 (-)
G142320 NA non-coding downstream 350711 7448773 ~ 7453604 (-)
G143371 NA non-coding upstream 140082 7944848 ~ 7945079 (-)
G143372 NA non-coding upstream 141512 7946278 ~ 7946521 (-)
G143316 NA non-coding upstream 145938 7950704 ~ 7985293 (-)
G143320 NA non-coding upstream 151302 7956068 ~ 7964780 (-)
CI01000027_07993673_08002214 ONECUTL non-coding upstream 198600 7993335 ~ 8006263 (-)
G143267 NA other downstream 130546 7669329 ~ 7673769 (-)
G142299 NA other downstream 364124 7439178 ~ 7440191 (-)
G142209 NA other downstream 646317 7153623 ~ 7157998 (-)
G142203 NA other downstream 661252 7141094 ~ 7143063 (-)
G141638 NA other downstream 1007608 6788627 ~ 6796707 (-)
G143325 NA other upstream 79769 7884535 ~ 7886049 (-)
G144365 NA other upstream 2734014 10538780 ~ 10542148 (-)

Expression


Co-expression Network