G142446


Basic Information

Item Value
gene id G142446
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 7804542 ~ 7804806 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU161855
GTGATCAATGAACTGTCATTCCTGCTGCACTGTGTGCGACTCTGCAGCTCGTGCTGGATGAGCAGAGCAGATGTTTACAATAGTTTACAATTGAAGCGACCGTTATCCAACTGAATTAAATGTTTTTTATTTCTATAAAAAAAAGCAAAACGACAGTGGAGGCGGTGCCACGGTGGGCACCGTAATGTAATTTAAATGTAGCGGTGGCATATTCATGGTGATATCGTGAGACAGCACAAGATCTCGTCACACCCCTAAATTCCGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161855 True 265 lncRNA 0.43 1 7804542 7804806

Neighbor

gene id symbol gene type direction distance location
CI01000027_07789066_07797594 NA coding upstream 6942 7784774 ~ 7800723 (+)
CI01000027_07695223_07701346 NA coding upstream 102719 7695046 ~ 7701823 (+)
CI01000027_07686575_07690215 GPATCH4 coding upstream 114195 7686575 ~ 7690347 (+)
CI01000027_07666350_07684399 GON4L coding upstream 120082 7666350 ~ 7684460 (+)
CI01000027_07634015_07663101 NPR1B, NPR1 coding upstream 141132 7633964 ~ 7663410 (+)
CI01000027_07843550_07849059 HAPLN2 coding downstream 38040 7842846 ~ 7849134 (+)
CI01000027_07932282_07935282 NA coding downstream 127121 7931927 ~ 7935342 (+)
CI01000027_07947743_07951397 NA coding downstream 142937 7947657 ~ 7951942 (+)
CI01000027_07954714_07957187 NA coding downstream 149908 7954714 ~ 7957449 (+)
CI01000027_07962587_07964571 NA coding downstream 157781 7962587 ~ 7964605 (+)
G142360 NA non-coding upstream 82312 7717120 ~ 7722230 (+)
G141380 NA non-coding upstream 268209 7536117 ~ 7536333 (+)
G141378 NA non-coding upstream 274540 7529799 ~ 7530002 (+)
G141330 NA non-coding upstream 289663 7502066 ~ 7514879 (+)
G142452 NA non-coding downstream 8854 7813660 ~ 7828067 (+)
G142465 NA non-coding downstream 26186 7830992 ~ 7907635 (+)
G142467 NA non-coding downstream 41816 7846622 ~ 7853206 (+)
G142475 NA non-coding downstream 54441 7859247 ~ 7860616 (+)
G142466 NA non-coding downstream 103765 7908571 ~ 7919981 (+)
CI01000027_07469157_07471720 NA other upstream 332828 7468964 ~ 7471999 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other upstream 846775 6951132 ~ 6957767 (+)
G141082 NA other upstream 903619 6898411 ~ 6900923 (+)
CI01000027_06706050_06708485 NA other upstream 1093910 6705983 ~ 6708513 (+)
G141052 NA other upstream 1532942 6271367 ~ 6271600 (+)
CI01000027_08026500_08029412 ENSAB, ENSA other downstream 221591 8025788 ~ 8032041 (+)
CI01000027_08255251_08264629 NA other downstream 453531 8255073 ~ 8264897 (+)
G143033 NA other downstream 1924009 9728815 ~ 9729551 (+)

Expression


Co-expression Network