G142475


Basic Information

Item Value
gene id G142475
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 7859247 ~ 7860616 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU161897
GGCATTTGGATTGGGTATCTAACAGAGCGATCTGAAAGCCAGCCAGCGTCACACTGCTCATAGCCGCTGTGGTACGCAGCCAGCAGCTGCTCTGGAGAAGCAATCTGAGCTCCAATGTCCTTGCACGCATCTTTGGCCTCATCAAAAGTGAAGGCATAGCGACTTGATGTGTGGCGGTAGAGAAAAACAACACCTAAGAACACACAGCATATTAGTGCTCCCATATATCACAGCTTTTGAGCTGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU161897 True 246 lncRNA 0.50 2 7859247 7860616

Neighbor

gene id symbol gene type direction distance location
CI01000027_07843550_07849059 HAPLN2 coding upstream 10113 7842846 ~ 7849134 (+)
CI01000027_07789066_07797594 NA coding upstream 61647 7784774 ~ 7800723 (+)
CI01000027_07695223_07701346 NA coding upstream 157424 7695046 ~ 7701823 (+)
CI01000027_07686575_07690215 GPATCH4 coding upstream 168900 7686575 ~ 7690347 (+)
CI01000027_07666350_07684399 GON4L coding upstream 174787 7666350 ~ 7684460 (+)
CI01000027_07932282_07935282 NA coding downstream 71311 7931927 ~ 7935342 (+)
CI01000027_07947743_07951397 NA coding downstream 87127 7947657 ~ 7951942 (+)
CI01000027_07954714_07957187 NA coding downstream 94098 7954714 ~ 7957449 (+)
CI01000027_07962587_07964571 NA coding downstream 101971 7962587 ~ 7964605 (+)
CI01000027_07973865_07979402 NA coding downstream 113079 7973695 ~ 7979463 (+)
G142467 NA non-coding upstream 6041 7846622 ~ 7853206 (+)
G142452 NA non-coding upstream 31180 7813660 ~ 7828067 (+)
G142446 NA non-coding upstream 54441 7804542 ~ 7804806 (+)
G142360 NA non-coding upstream 137017 7717120 ~ 7722230 (+)
G142466 NA non-coding downstream 47955 7908571 ~ 7919981 (+)
G142526 NA non-coding downstream 54708 7915324 ~ 7915643 (+)
G142491 NA non-coding downstream 87041 7948341 ~ 7948477 (+)
G142546 NA non-coding downstream 128503 7989119 ~ 7989331 (+)
CI01000027_07469157_07471720 NA other upstream 387533 7468964 ~ 7471999 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other upstream 901480 6951132 ~ 6957767 (+)
G141082 NA other upstream 958324 6898411 ~ 6900923 (+)
CI01000027_06706050_06708485 NA other upstream 1148615 6705983 ~ 6708513 (+)
G141052 NA other upstream 1587647 6271367 ~ 6271600 (+)
CI01000027_08026500_08029412 ENSAB, ENSA other downstream 165781 8025788 ~ 8032041 (+)
CI01000027_08255251_08264629 NA other downstream 397721 8255073 ~ 8264897 (+)
G143033 NA other downstream 1868199 9728815 ~ 9729551 (+)

Expression


Co-expression Network