G143403


Basic Information

Item Value
gene id G143403
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 8115839 ~ 8117546 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU162930
GCTGTCAAACAAAGAAATTATGACACATACAAAAACGAGAGAGAACCAATGAAATAATAATAACTGATTATGTTGTAGTCAATGCTTTTTCCTGTGAGCTTTTTTGTTTTTCTATGCTGATCATAAAATCATTAAACATCATATACAGTGTTACAAGAGCTGTACATAAATGCACGAAGAAGATGAAGATGAGTATTCTAGTAAGTCTTTAATAAAACACAGGAGATTCCAACAGGGTAGCAACAGCATAACATAAACGAGACCGGACAACATGCACTGAAAACACAGGAACTTAAATACACAGGTAAATGAGGAGATTAAACGGAAACAGCTGAGAGTGATAGCAAATCATATAAGTAACCATGACAACAAAGGAGAAGCTGGAAAACTAAACAATGGAACACATGTGACTGAAAGTGACAAAATAAGAGTCCATGAGAATGAAACTAACTAAACGAAACTGTAACATTACGCCCCCTCTCGGAAAGGCGCGTCCTCGCGCCGTAACAGAAGAGCAGAAGGAGGGATGGTGGGGGCTTGGGAGGTGGGTGAGGAGAAGACGCAGGGATGGAGAGAGGAGCAGGCAGAGAGAAGGTCGAGGCAGATGGAATAAACCATGGAGGAGTAGATGGAGGTAGCAGCCACGGAGGAGAAGTATAGAGAGCCCAGATGGTGCAGACCCAGAGCCTGACCAGAACCACAGCCCACGGTGGAGTAGATGGAGGGAGGAGCCAATGTGTCGACTCGGCTGTCGACATCCTGGTGACGATCAATGGAACTATAACTTTGGTTTGGCAAGCCCACGACACCGCCGGAGAGCTGAGGGAGTGATGGGACGCTGAAGACCAGGGTGGCCATGACGGAGCCAAAGCGGCGCCCCTCCGAGGAGACGGTAGGGATCCGGAGGCCAGAGGTCGAGCTGGGATGAGTGAGGGCGGAGGTGATGCCTCAGGGAAGGTGGAGCTTGCCGGAGCCGAAGGGGTGGAGGGCCGGAGGGCAACGGACGGCCCGTAAGTCCGACGTGGAGGCCTGGCGAGGTCTGACCTGGGTAGAGCCGACGGTCCGAAGGAATCCGGTGAGGCCGAATGGCTGATGGTCACTGCCGGAAACGAGTGTGGAAGGAGCATCGGCGTAGGAGTCAGGACGACCGGTTGAGGTGGATCAGCATGCTCAGAGGCTGTAGGCGGAGCCACGAGCTCAAGACACCCATGAGGAAGTGGTTCCCGGCAGGTCCGCGGAGTGTCCACGCCACTGAGAGGAGGTGATGGAGATGCAGCGGGACTGATGGGGAACACTGACGACTGTGTGGTAGGTGAGGCTGAGGACAGAGAGACAGATGGGAGAACAGAACAAAACCCAACGAAAAATAAAGCAGTCCTGATGGCTGTTTCAAGAGGTGGGTGGGACTCGCATTCATACCCTCATATTCCACGAGGTACTGGAACATGACGTCGGCTCACACCCCGGGTCAGACACGTCTATCAGCTTCGACTCTGGGTCGATGGTGTGCGTTGTCCTCCTTTCCTGAGGTACTGGCTCACCGGTCACGGCAGGCAGAAGCATCCAGTCTGCGGGGGGCTCTGGCGTACAGTCCGTCGATTGGGGTGGAGACGGGTTGGGCTCTGGGTTGGGCTGCAAGACGTCTGCGGGGTGGGACTGGACATTGATGTTACTGTCAACATCCGCTTCGTCCACTGTGAATGTGGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU162930 True 1708 lncRNA 0.53 1 8115839 8117546

Neighbor

gene id symbol gene type direction distance location
CI01000027_08091338_08097220 NA coding downstream 18619 8091293 ~ 8097220 (-)
CI01000027_08081583_08083496 TNFAIP8L2B, TNFAIP8L2 coding downstream 32343 8081269 ~ 8083496 (-)
CI01000027_08073979_08077754 SCNM1 coding downstream 38085 8073661 ~ 8077754 (-)
CI01000027_08016916_08025375 NA coding downstream 90384 8016529 ~ 8025455 (-)
CI01000027_07993673_08002214 ONECUTL coding downstream 112174 7993335 ~ 8006263 (-)
CI01000027_08134523_08134951 NA coding upstream 16941 8134487 ~ 8135309 (-)
CI01000027_08285855_08291534 NA coding upstream 168223 8285769 ~ 8292823 (-)
CI01000027_08422679_08426771 CCT3, TCPG, CCT3.L coding upstream 305133 8422679 ~ 8426771 (-)
CI01000027_08429132_08434558 NA coding upstream 310766 8428312 ~ 8436258 (-)
CI01000027_08443968_08446252 NA coding upstream 325631 8443177 ~ 8446436 (-)
G143395 NA non-coding downstream 22246 8093317 ~ 8093593 (-)
G143393 NA non-coding downstream 25108 8090002 ~ 8090731 (-)
G143389 NA non-coding downstream 62981 8052511 ~ 8052858 (-)
G143314 NA non-coding downstream 81858 8032981 ~ 8033981 (-)
G143385 NA non-coding downstream 92857 8022754 ~ 8022982 (-)
G143422 NA non-coding upstream 53040 8170586 ~ 8170812 (-)
G143502 NA non-coding upstream 110605 8228151 ~ 8228372 (-)
G143504 NA non-coding upstream 115639 8233185 ~ 8233388 (-)
G143476 NA non-coding upstream 159722 8277268 ~ 8319468 (-)
G143557 NA non-coding upstream 241276 8358822 ~ 8359102 (-)
G143325 NA other downstream 229790 7884535 ~ 7886049 (-)
G143267 NA other downstream 442070 7669329 ~ 7673769 (-)
G142299 NA other downstream 675648 7439178 ~ 7440191 (-)
G142209 NA other downstream 957841 7153623 ~ 7157998 (-)
G142203 NA other downstream 972776 7141094 ~ 7143063 (-)
G144365 NA other upstream 2421234 10538780 ~ 10542148 (-)

Expression


Co-expression Network