G143463


Basic Information

Item Value
gene id G143463
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 8528645 ~ 8533178 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU162994
TCTTAATACTTTTATTGAAATAATATCCTGTACATGTTGTCGTATCAATTTTATTATTCTCTCAATGAACATTGGCATATTGAGATGATTTGAGTTTAGATTAAAAAACTAGCAGCTTCATTCAAGTAAAAACATTTTTAAATGTCACAAAAGAAACAAAGTGGGTTATTAATTGTCTTTATTACCCACTGACTTTTTAAGCAGTCCAGATACTCCATAAACACAGTGCAATTCAAGACATTGTACAGTCCAGACTGCTGTGTAGATAATATGCACACAAACTCAAATACAAACACGTACATGATAAAACAAATGAAAATCATTAAATATAGATATCAATGTTAATTATCACTTGGTTATCAAATAGAAATATTTTCAGTACTCCTACCTTAAAACAATTAAACTAAAATAAACTCACTCAAATGCTCTTAATATGATTTTGGCTTAATTCAGTAATAATAATGTAGTATTATTGCTAGTTCAAGTTCGTTTCTCTCCGAAGACTCAACATGTAGATTCAAGTGTATGGAAACCATTTGACATGATAATAGAGCTTGTGTGCGAACATTCAATACCTTAAAGGGATAGTTCACCAAAAAATGTAAATTCTGTCATCATTTACTCACCCTCATGTTGTTCCAAACCCATATGAACACAAATTATTTTTTTGGGAAAATGTCTTTTTTGTCAATACAATGAAAGTCAATTGTTTTGAACGCCACTAAGTTTCCTTACATGGACATAAAAAAATTTTTTTTTGGTTGAAAAGTCATTTTTGGTTGAACTGTCCCTTTAAGTAAACACCAAACACTTTGTGACATTGTGAGTAATTACTGATCATGTGAAACATTCCTCAATCCGCTTAGTTTTTAGAAATTATTCTTTTCCCTTAGTTGACAGCTTGATTCGACCACAGCAAGCCATGCAGCCTAGTCATGGCATAGGCTGTGAGTGCATAGCCACCCTGGGAATCTCGCAAAATTCCCACCATCCAATCCGGTAAACCGATAAACTCCAGAAACGGGACCAGATTCACTCCTCTGCGGAGAACATTAACATGTCACTCATTTATCTTTACAAAAGAGAGATTGTTTGCTTTTGTAACCTCAAAGTGTTGTTTGTATAGCAGTAGTTGATTGTCCAGATGATGCTGGTAAAGCTTGTCTGTCCTGCTTAAGCTCAGACAGACCTATCTGGTAAAACTCCATCTCCCTGCCAGCCTCACCTTAAGGTCTGTGCGCTCAGTCTGTATGTTCAAAGGCACTTCAATTCATGTTGTTTACTTAATTCAAATCTCTTCTAGCCCATCAAGTACCACAAGACAACCAATCAACATACATAATGAGCTCAATTACATATGTAAATACATCATATTCATAAAGTTACATTAATTGTAGTGAAGCGCATTATATCGGTACCATATTAGTTATCAGATTATCTTTAAATTTCTTAATTTATTTTAATAGTGCATGCTCATTTCCATTCTTTTCCATATTTAGATTACCTTTGCTGTCAACTAATATTCACTTTATCTTTAAAAACACTCATTTAATAACACTGTAAATGTAATTGTCATCTTGTTAGGTTTTACTAATGGTGTGTTTCTGTGCAGGATGCTGATGGTCACTTACTTCATTGCAGCATAATAGAAGCTCCCAAACCACACTGTGGACGTGACGATGTGCACAGGCACCATGACTTTACCATACTGTTTAAACGTCTTTTTAAACCTCTGGAAGAGCCCGATAGATTTGTCCTGCAGAGGGTCGACATCACCCTTACTCTGAAGTTCAGACCCTGTATCAGGCTTATACAGACCCTCAGTCCCTGCTAGACTCTGCGGAGGATTTAATGGCGTTTCTTCCTCTGTGGACGTTTTGAGGCCCTCCTTCGTCCTGATGACATTAGTGCAACTGAAGCAGCGTGAGGTCTGGACGGTCACAGGAAGCTCACGTGCAGCCCAGGTGTGACCCAGGTACGCAGAGCGCAGCAGGACCACACGCCGCAGTGTGACTGGAGCCCACATCCGCTGCATCACCTCCCCCACCTACAGAGCGCCACCTAAAGGACCTGGACAGTGTCAAACAACAGTTACACACACAAGCTATTAAAGGGTTAGTTCACCCAAAAATGAAAATAATGTCATTAATTACTCACCCTCTCGTCGCTTTATAATATTAAGGTAGAACCACTGTACTCACATGAACTGTTTTAAATATGTTTTAAGTACCTTTCTGGATCTTGAGAGGTTCGGTGACATTGCTGGCAATAGAGGCCTCACTGAGCCATCGGACTTCATCAAAAATATCTTAATTTGTGTTCCGAAGATGAACGAAGGTCTTACGGGTGTGGAACGACATTTTCATTTTTGGGTGAACTAACCCTTTAACATCTGGCTAATGATCTACAGTAGCAGTTAAAAATTTGGTCACACTTGAATTTGTGTCTCATTACTTTAAAATCCTTTTGATTTTTTGAATGAAAGGCTGGAAATTACAAATATAAAAGTATGAATTACTTAATTATTTTAATTTTAAAATAAATACTATATATATATCCGTGCTTCCCACGCACGACTTTACCTGGGTGGGACATTTAAAAAGTATATTTGGTGACACATTTTTGCTTTTATTATTTTTTATCCTATTATACTTTTTTATCCACCCGAGATAATGAAACCATCTGCGATCGATTTAGTAGAAAATCTCCCCTCACTCTACGTCTGTGTGTGTGAGAACAGTTTACTCCCACTATATATATATATATATATATATATATATATATAATTTTTATTACAATTTTATTTAATAATTTTTTATGTAGGAGTTAGCCGCCTGGATAATGACGCTAAATGCAGCTAACTAGTGCCAAGGATACATGGAAATTTGTTCAATAAAAACATCCTGATTTCAATCTATGAAAAAATAGCTACTTTGAAGAAAATAAAAACATTATGTAATATGACTTTTAAAAAAAACAAGTACTATGTTGACTCTGCTTTAGGTTACTGTAATGCAACCTAAAATGTTTTTGGAAGTTTTAAACTTGACTATATATGATCTATTCTAGTTAGACATAAGTCACACAGGCTGAGCATGATGAACACATGCCATTGGTCAGGTTAGGGTCATGGCTCTCTGTCAAACACCAGACTGATCAGGTTAAAGACAAAGTACTGTAATTCCAAAGATTAACGAGGTTAGTTTTAACCAGTCAGCTAAACTTGACAAATCATCTGTTTATTATTTTTGCAGTGATGAGAATATTCCCTTAAACTTTCTTCATTGTTTTATATTTTAACACAACTGTAAAATGTTTCCAACCTTCTAAGCAAAAGACCAAGCATCTTAGCCGATAAATTAAAGTTGTGTTTTATGTTTAGCTTCATAACATTATATGAATAGAGATATTTACTCAGTCACAAAAGTGTCAACACATTTAATCCACTAGAAGTTTAGGGATAAATTCCTGAAAGTGTTTTTATGAACTAACACCAATCTGCCCGGAACTAAGCATGATCAATAAGCTATATGTTGTTCTTTTACGTATGACATTGGGGGTTGTTATGGAGGACATAGACGTTTGCAGAAGTAGAAACACTACAGCTCAAGTTAACAGGGCCCTGATCTGAACTTCAACACACCGCTTTGCCACTCCTACAGGATCACACATACATACACACACACACACCCAGAACAGCTGAAACAACACCAAATATATCAGCTTTAAGAAATAGTTAGAAATAGTTCGTTAGAAACAGAGTGGCAACTTACATTCACCTCTTGAAGGTCTGCTGTGTGATTAAGGGGAGTCCGCGCAGCGCTTCATACCTCTACAGACTCATGTCATGTACACGCACGTTCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU162994 True 3866 lncRNA 0.36 2 8528645 8533178

Neighbor

gene id symbol gene type direction distance location
CI01000027_08514843_08515829 MC5RB, MC5R, MC5RA coding downstream 10304 8514488 ~ 8518341 (-)
CI01000027_08483034_08503082 LMNA coding downstream 25563 8482939 ~ 8503082 (-)
CI01000027_08443968_08446252 NA coding downstream 82209 8443177 ~ 8446436 (-)
CI01000027_08429132_08434558 NA coding downstream 92387 8428312 ~ 8436258 (-)
CI01000027_08422679_08426771 CCT3, TCPG, CCT3.L coding downstream 101874 8422679 ~ 8426771 (-)
CI01000027_08537911_08550747 LDLRAD4B coding upstream 3649 8536827 ~ 8551458 (-)
CI01000027_08568349_08570750 NA coding upstream 34807 8567985 ~ 8570750 (-)
CI01000027_08595524_08646502 NA coding upstream 61760 8594938 ~ 8646502 (-)
CI01000027_08671118_08685781 NA coding upstream 137917 8671095 ~ 8685781 (-)
CI01000027_08688706_08696073 SLC45A4 coding upstream 155513 8688691 ~ 8697369 (-)
G143585 NA non-coding downstream 20681 8507732 ~ 8507964 (-)
G143570 NA non-coding downstream 86280 8441509 ~ 8442365 (-)
G143560 NA non-coding downstream 136984 8391458 ~ 8391661 (-)
G143459 NA non-coding downstream 140536 8385961 ~ 8388109 (-)
G143469 NA non-coding downstream 157186 8363672 ~ 8371459 (-)
G143479 NA non-coding upstream 45250 8578428 ~ 8590320 (-)
G143597 NA non-coding upstream 122002 8655180 ~ 8655488 (-)
G143598 NA non-coding upstream 124131 8657309 ~ 8657680 (-)
G143601 NA non-coding upstream 126882 8660060 ~ 8660513 (-)
G143602 NA non-coding upstream 127780 8660958 ~ 8661221 (-)
G143325 NA other downstream 642596 7884535 ~ 7886049 (-)
G143267 NA other downstream 854876 7669329 ~ 7673769 (-)
G142299 NA other downstream 1088454 7439178 ~ 7440191 (-)
G142209 NA other downstream 1370647 7153623 ~ 7157998 (-)
G142203 NA other downstream 1385582 7141094 ~ 7143063 (-)
G144365 NA other upstream 2005602 10538780 ~ 10542148 (-)

Expression


Co-expression Network