G143652


Basic Information

Item Value
gene id G143652
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 8784411 ~ 8784631 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU163187
ATGCGATATAACTAAGATATTCGTTAAATAAAACAGGAGTTTCGGCGCGTGTCCAGAACTCAGTCACTGATAAACTCATGCTGTTTGATTGACAGCTCCAACGATTGCAAAGGGAGCGTTCTTTGATTGCTTTCCTTATATAATTTAATCACCGTTTAAATAACAGATTATAAGAGAAACAATGTTAAGTTGACATTTTCACTGGTTTGATTTACTGACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU163187 True 221 lncRNA 0.35 1 8784411 8784631

Neighbor

gene id symbol gene type direction distance location
CI01000027_08713799_08734144 DGAT1B coding downstream 50267 8713554 ~ 8734144 (-)
CI01000027_08701843_08702938 NA coding downstream 81473 8700782 ~ 8702938 (-)
CI01000027_08688706_08696073 SLC45A4 coding downstream 87042 8688691 ~ 8697369 (-)
CI01000027_08671118_08685781 NA coding downstream 98630 8671095 ~ 8685781 (-)
CI01000027_08595524_08646502 NA coding downstream 137909 8594938 ~ 8646502 (-)
CI01000027_08820113_08821952 SCRT1A, SCRT2, SCRT1, SCRT1B coding upstream 35388 8820019 ~ 8822352 (-)
CI01000027_08864430_08897266 MROH1 coding upstream 79637 8864268 ~ 8897266 (-)
CI01000027_08940113_08943539 NA coding upstream 155235 8939866 ~ 8943539 (-)
CI01000027_08946941_08955434 CSK21, CSNK2A1.S, CSNK2A1 coding upstream 160682 8945313 ~ 8955434 (-)
CI01000027_08959339_08969831 PTP4A3, PTP4A3.L, MGC131305 coding upstream 173451 8958082 ~ 8969831 (-)
G143636 NA non-coding downstream 19715 8764477 ~ 8764696 (-)
G143623 NA non-coding downstream 45341 8738847 ~ 8739070 (-)
G143622 NA non-coding downstream 45581 8738614 ~ 8738830 (-)
G143467 NA non-coding downstream 71397 8711803 ~ 8713014 (-)
G143615 NA non-coding downstream 74882 8709127 ~ 8709529 (-)
G143660 NA non-coding upstream 7358 8791989 ~ 8792712 (-)
G143749 NA non-coding upstream 145769 8930400 ~ 8935626 (-)
G143781 NA non-coding upstream 350179 9134810 ~ 9135017 (-)
CI01000027_09210702_09220403 CDC42.L, CDC42L, BRAFLDRAFT_122664, CDC42 non-coding upstream 435414 9209711 ~ 9220819 (-)
CI01000027_09252655_09272284 NA non-coding upstream 467805 9252394 ~ 9273662 (-)
G143325 NA other downstream 898362 7884535 ~ 7886049 (-)
G143267 NA other downstream 1110642 7669329 ~ 7673769 (-)
G142299 NA other downstream 1344220 7439178 ~ 7440191 (-)
G142209 NA other downstream 1626413 7153623 ~ 7157998 (-)
G142203 NA other downstream 1641348 7141094 ~ 7143063 (-)
G144365 NA other upstream 1754149 10538780 ~ 10542148 (-)

Expression


Co-expression Network