G143060


Basic Information

Item Value
gene id G143060
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 9467823 ~ 9468042 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU162535
AGGCAAGTAATATTTATAAAATATATGTCCATTAATATCTGTAATTATGTTCAGTGTAATCAGTTTAAATATAATAATATGAATTTATAATAATATGAATTTATTATTATTTATTATTATTAAGCCTTTATTATTACTACTTCTAGCTGGGTATGCTGCCCATTTCAAAAACAATGTTACATGAACTGGGATTTACGAATTAAACAGACACTGATGAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU162535 True 220 lncRNA 0.24 1 9467823 9468042

Neighbor

gene id symbol gene type direction distance location
CI01000027_09459448_09462994 NA coding upstream 4723 9459448 ~ 9463100 (+)
CI01000027_09448387_09455263 NA coding upstream 12530 9447047 ~ 9455293 (+)
CI01000027_09424746_09432978 NA coding upstream 34352 9424746 ~ 9433471 (+)
CI01000027_09414743_09422093 SPHK2 coding upstream 45344 9412872 ~ 9422479 (+)
CI01000027_09398846_09400911 NA coding upstream 66582 9398846 ~ 9401795 (+)
CI01000027_09484034_09501412 KLHL32 coding downstream 15992 9484034 ~ 9502255 (+)
CI01000027_09562530_09572606 NA coding downstream 94454 9562496 ~ 9572635 (+)
CI01000027_09661837_09663114 POU3F2B, POU3F2 coding downstream 193481 9661523 ~ 9663857 (+)
CI01000027_09767653_09768743 NA coding downstream 299611 9767653 ~ 9769402 (+)
CI01000027_09774092_09779035 NA coding downstream 305950 9773992 ~ 9779129 (+)
G143004 NA non-coding upstream 43223 9423411 ~ 9424600 (+)
G143031 NA non-coding upstream 44675 9422922 ~ 9423148 (+)
G143009 NA non-coding upstream 61794 9404744 ~ 9406029 (+)
G143050 NA non-coding upstream 133944 9332701 ~ 9333879 (+)
G143062 NA non-coding downstream 3127 9471169 ~ 9472939 (+)
G143064 NA non-coding downstream 6139 9474181 ~ 9474690 (+)
G143061 NA non-coding downstream 6967 9475009 ~ 9475610 (+)
G143066 NA non-coding downstream 8349 9476391 ~ 9478186 (+)
G143075 NA non-coding downstream 90080 9558122 ~ 9558380 (+)
CI01000027_08255251_08264629 NA other upstream 1206997 8255073 ~ 8264897 (+)
CI01000027_08026500_08029412 ENSAB, ENSA other upstream 1435782 8025788 ~ 8032041 (+)
CI01000027_07947743_07951397 NA other upstream 1515881 7947657 ~ 7951942 (+)
CI01000027_07469157_07471720 NA other upstream 1996109 7468964 ~ 7471999 (+)
CI01000027_06951132_06956691 GLIPR2, GLIPR2L other upstream 2510056 6951132 ~ 6957767 (+)
G143033 NA other downstream 260773 9728815 ~ 9729551 (+)

Expression


Co-expression Network