CI01000028_06937034_06956621 (GNB5B)


Basic Information

Item Value
gene id CI01000028_06937034_06956621
gene name GNB5B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 6936818 ~ 6956621 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000028_06937034_06956621.mRNA
GTCCAGCCTCAACCAGACGCAAAGATGTGTGACCAGACATTTTTGGCCATCACGTTTGGCCCGTGTGATAACTGCAGTCAGAACAAGCCTCTGATGAATATTTATCTGAAGAATGAGCCCATCAACTACTGCTCGCTGTGTGTGGAGCTGATGGCCTGTCAGGGACTGGCGAAGGGTGAAACCATCCACACACTGAAAGCGGAGTCTGAGTCTTTGAAATCCAAACTAGAGGAGGAGAGAGCCAAACTACACGACGTCGAGCTGCATCAGGTGGCAGAGAAGATGGAAGCTCTGGGTCAGTTTGTCATGAAGACCCGGAGAACTTTAAAAGGACATGGAAATAAAGTGCTGTGCATGGACTGGTGCCGGGACAAGAGAAGAATTGTTAGCTCCTCTCAGGAGCATGCAGTCACTATGCCCTGCACCTGGGTCATGGCTTGTGCTTATGCCCCCTCTGGCTGTGCTGTGGCTTGTGGACACTGTGATGTTGCATTGACATTTCATCTGCTGGGATCAGTACAGCTGAGTGTAGGCACTGCAGTGCGCTATGTGTGGAGATGGTCAATTTGTGTTAATTCAAAGTTTATTAATTCAGCTCTAATCAGGACAATAAAGATAGAAAAAGATGAAGTGAAAGATTTTGTTACGTCAAGGCAGATTCTGACATCAAGTGGTGATGGGACATGTGCATTATGGGATGTTGAGAGTGGACAGCTGCTGCAGAGTTTCCATGGTCACTCGGCTGACGTTCTCTCATTGGACCTTGCCCCCTCTGAGACAGGAAACACCTTTGTATCAGGGGGCTGTGATAAGAAGGCTAATGTGTGGGACATGCGCTCGGGACAGAATGTTCAGTCCTTTGAGACCCATGAGTCTGACATCAACAGTGTGAAGTATTACCCCAGCGGCGATGCTTTTGCATCTGGATCTGATGATGCTACGTGTCGTCTGTATGACCTGCGAGCTGACCGTGAGGTGGCCATCTATTCCAAAGAAAGTATCATTTTTGGAGCCTCTAGTGTGGACTTTTCCCTCAGTGGGCGATTGCTCTTTGCAGGACATAATGACTATACCATTAACGTCTGGGATGTATTGAAAGGTACCAGAGTGGCTATTCTCTTTGGCCATGAAAATCGGGTCAGCACTGTCAGAGTGTCCCCAGATGGTACCGCATTCTGCTCAGGGTCATGGGATAACACTTTGCGGGTGAGTGTCCGCTTCAGTTCATATAGAAAAAGTCACTTACTTGATTTTGCTCTTTACTGGCATCAGGGGCTTTAAGATGAAAGTAAAGGGACTGGCCGTGGTTATAGGTGTTTTACACCATCCTGTGGTGTCTGCCCCGAGAGCAGCAGGGGAATTACGCAACATAGGTCATAGCGTCCACGTGATCTACTCTTTCTATCCTGAATAAGTAAACATAAGAAATTTCATTGTTCCTCTTTTGTGAGTTAGCAAATCGTTGTGAGGATCATCTTGGTTTGTTTTTTGAATAAA

Function

symbol description
gnb5b Predicted to enable signaling receptor complex adaptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway and dopamine receptor signaling pathway. Predicted to act upstream of or within signal transduction. Predicted to be located in membrane. Predicted to be part of heterotrimeric G-protein complex. Predicted to be active in cytoplasm. Is expressed in cardiovascular system; cranial ganglion; neurons; and visual system. Orthologous to human GNB5 (G protein subunit beta 5).

GO:

id name namespace
GO:0007165 signal transduction biological_process

KEGG:

id description
K04539 GNB5; guanine nucleotide-binding protein subunit beta-5

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000028_06937034_06956621.mRNA True 1497 mRNA 0.47 11 6936818 6956621

Neighbor

gene id symbol gene type direction distance location
CI01000028_06930121_06933901 BCL2L10 coding downstream 2037 6929823 ~ 6934781 (-)
CI01000028_06756364_06785862 TMOD3, TMOD2 coding downstream 148228 6756343 ~ 6788590 (-)
CI01000028_06736522_06738241 LYSMD2 coding downstream 198577 6736480 ~ 6738241 (-)
CI01000028_06681287_06690095 ACADL.L, ACADL coding downstream 246650 6681168 ~ 6690168 (-)
CI01000028_06565728_06571617 GLDN coding downstream 364796 6564707 ~ 6572022 (-)
CI01000028_06969947_06983352 NA coding upstream 11728 6965064 ~ 6984084 (-)
CI01000028_07010842_07012858 NA coding upstream 53202 7009823 ~ 7012858 (-)
CI01000028_07102169_07103695 NA coding upstream 145506 7102127 ~ 7103717 (-)
CI01000028_07124749_07145384 NA coding upstream 166094 7122715 ~ 7147109 (-)
CI01000028_07148224_07150338 NA coding upstream 191273 7147894 ~ 7150492 (-)
G149524 NA non-coding downstream 19665 6916920 ~ 6917153 (-)
G149522 NA non-coding downstream 20536 6916043 ~ 6916282 (-)
G149520 NA non-coding downstream 21397 6915155 ~ 6915421 (-)
G149519 NA non-coding downstream 21740 6914808 ~ 6915078 (-)
G149514 NA non-coding downstream 29543 6906616 ~ 6907275 (-)
G149535 NA non-coding upstream 35459 6992080 ~ 7053464 (-)
G149554 NA non-coding upstream 120368 7076989 ~ 7116309 (-)
G149567 NA non-coding upstream 149035 7105656 ~ 7112425 (-)
G149480 NA non-coding upstream 214315 7170936 ~ 7228043 (-)
G149329 NA other downstream 235578 6699513 ~ 6701240 (-)
CI01000028_02441408_02445596 RPL35A, GM10247 other downstream 4490505 2441332 ~ 2445596 (-)
G146238 NA other downstream 4776780 2147378 ~ 2160038 (-)
G146190 NA other downstream 4825553 2097570 ~ 2111265 (-)
CI01000028_00474810_00475211 NA other downstream 6461472 473609 ~ 475211 (-)
G149474 NA other upstream 273170 7229791 ~ 7232783 (-)
CI01000028_07527725_07535631 ARPP19 other upstream 569341 7525962 ~ 7535743 (-)
G149923 NA other upstream 1017947 7974568 ~ 8024244 (-)
G150328 NA other upstream 1736777 8693398 ~ 8693743 (-)

Expression


Co-expression Network