CI01000028_07209430_07220674


Basic Information

Item Value
gene id CI01000028_07209430_07220674
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 7208209 ~ 7220801 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000028_07209430_07220674.mRNA
ACATGGGCCCCACATACAAATGTTGTCTGTGTTAAAGCTGGGACCGAGACAGGTCTTATGTGTTGCCCACTTGGGTCCCACCTAGTGACAGGTGCAATTCTGCATGAAATCCATCAGGGCAGTTAACATGGGGCCATTATGGAACCCACGGACAATCCTACATGGGGCCCATTTTCAGCCCATTTCATACTCATATGGACCCCACATACAAATGTTATGTTATGCAAATGGCTTTATGCATGTCGCTGTCTGTGCAGGACTAGTCAGCTGCAACAGTAACGGAACTTTGAACTCCGCTGGAAGTTCTTTTTCAGCAGTCCAGAAGATGGACTCAAAGACTAACAACTACATCCGGAAGTGGCTGGGCCTCCCCCGATGTCTGTCAAACACAGCCCTGTTTGGAAGAAACACCTTGAGGCTCCCATTGAAATCCATCAGTTTGGGCTATAAGCTGACAAAAATAAGGCTAGTATTCGAGCTGAAAGACTCACAGGATCTAGCAATGCAAAACACTAAGTCCCAAAGGAACCAAGTTGTCAAAGGCATTAAAAGATCTGCAGAGGAGGCAGAGAAAGGGATTCTGGCACTGGCGATGGAGAAAGGACAAGGATCAAAGGAGCAAAACATCAATGATGGGTGGCTCCAGGATGACGACTCTGTAGCCAGCCCAAATGGCACTGTTGGAGGTGTGGCAGGCAGAAGTGCCTTGCAGGTATTCCTACCTGTGCTTACAACTGTATACTTCTTGCATAAGGTATACTTGCAACTTTGCAACTGTGATCTAAAGTATGAAACAGGATCAAATAATAAAAACTCCAGTGGAATGGTGGAAAGAAACATAACACCAGTTAATGAGACACAAAACCAGATTCCAGGCCATATGCAAAATGGTTGTGAACACAAATGTAAAGTTGATGATGATACTTTAGTAGTTAAGAAGGTGAACTTTGTTGGTTTTATTTGTCACATCATTAATGTTGCATCACAGTTAAAAAAGAAAAGTGATAGAATTAAGGCTATTGTAGAGGCAGCAGGGAAATTCCTTGATATGAGGGATGTCAAAGCAGATCAGATACATGCATTGTTGACAATAACTGAAAATGGAGAAAACACACAAGCTGATGGTTAGGATGTTGATTATGATACTACACATTCTACAGTGGAATGCTAGAAGCCTTATAGCTAACGGTCAAGAATTTAAAAAGTTCATTCATGAATTAGATGTTGTTCCAGATGTAGTATGTGTACAAGAAACTTGGTTACGAGCCCAACTAGATTTTGTGATGCCAGGGTTTAGTTCTGTAAGGTGTGATAGATCTAACAACCAAAATGGTGGAGGGTGTATTACCTTTATTAAGGATGGGTTGGCTTATAGGGAGATTCCCTGTCAAGGAGATATGGAGTGTGTAATAGTTGAGATCTCTAGTCCAAGGAAAGAGGGAAATATTAAGTTAATTAATTTCTATAATCCATGCAAAAATTTGGATGTAAACAAATTAAATGAAATAGCAGGAAATGTATACAGGAAGGAAGGGATTTCAACACACATAACAGCTTATGGGGTAGCAATCATACAGACAAAAAAATGGGAATGTAGTTGAAGAAATGATGGAAGAAAGATCATTGGCCTGCATTAATAATGGACAGGGTACAAGAATAGATGTGAAGAAAGGTAATACATCATGTTTGGATCTTATGTTGGTATCAGATAGTTTGGTAACTGCATGTGACTGGTATGTCAAAAATGATTCTACCATAGGAAGTGACCACTATCCAGTTAATACAAACGTATGGTTATTCAAGAAGGAGGTACAATTAGATGGTGAAATAGATGGTGTTTTGAGAAAGCAGACTGGGAAAAATGTAAGACTTGTTGTGAAATGTCAGTAAATTCGGTTACATTAGAAGGAGACATTAGAGGATTGTACAAGGCAAGTTACAGAACATATTTTAAATGCAGCTATTTTGAGTATACCAAAAAGAATAACAAAAGGGAAAAAGAAAGTGGTTCCTTGGTGGAATGAAGAATGTAGCAGAGCTGTTAAAGAGCGAAATTAGGCATTTAGAACGCTGAAGAAAGATCTCTGTCAAGAGAATGTTATAGAATATCAAAGGAAGAGAGCAGTGGCGCGCAGGGTAATTAAATATACTATAAAAAGAGAAACTGGAGAGAGTTCTATTCCTCCATAGGTAGAGGAGTAGATTTAGCGGATATATGGTCTATGTTTAAGAGAATGAGTGGGAAAAGGAAAGATATTAAAATTCCAGCTTTGATTGATGGGGAAAAGGTGGTGATAACCTTACGGAAATACATAAGCAACAGATAGAACTTGCACTGAGAGAAAATAAA

Function

NR:

description
hypothetical protein EH28_11253

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000028_07209430_07220674.mRNA True 2350 mRNA 0.39 4 7208209 7220801

Neighbor

gene id symbol gene type direction distance location
CI01000028_07189923_07200164 NA coding downstream 7952 7189276 ~ 7200257 (-)
CI01000028_07148224_07150338 NA coding downstream 57717 7147894 ~ 7150492 (-)
CI01000028_07124749_07145384 NA coding downstream 61100 7122715 ~ 7147109 (-)
CI01000028_07102169_07103695 NA coding downstream 104492 7102127 ~ 7103717 (-)
CI01000028_07010842_07012858 NA coding downstream 195351 7009823 ~ 7012858 (-)
CI01000028_07236259_07242539 NA coding upstream 15398 7236199 ~ 7242940 (-)
CI01000028_07257403_07298334 NA coding upstream 36376 7257177 ~ 7298334 (-)
CI01000028_07328793_07405548 MYO5A, MYO5AA coding upstream 107521 7328322 ~ 7406679 (-)
CI01000028_07424181_07428224 NA coding upstream 203164 7423965 ~ 7428549 (-)
CI01000028_07527725_07535631 ARPP19 coding upstream 305349 7525962 ~ 7535743 (-)
G149606 NA non-coding downstream 12658 7195141 ~ 7195551 (-)
G149554 NA non-coding downstream 91900 7076989 ~ 7116309 (-)
G149567 NA non-coding downstream 95784 7105656 ~ 7112425 (-)
G149535 NA non-coding downstream 154745 6992080 ~ 7053464 (-)
CI01000028_06969947_06983352 NA non-coding downstream 238577 6965064 ~ 6984084 (-)
G149632 NA non-coding upstream 31993 7252794 ~ 7253110 (-)
G149637 NA non-coding upstream 72791 7293592 ~ 7293796 (-)
G149467 NA non-coding upstream 103999 7324800 ~ 7326970 (-)
G149657 NA non-coding upstream 151236 7372037 ~ 7373033 (-)
G149329 NA other downstream 506969 6699513 ~ 6701240 (-)
CI01000028_02441408_02445596 RPL35A, GM10247 other downstream 4761896 2441332 ~ 2445596 (-)
G146238 NA other downstream 5048171 2147378 ~ 2160038 (-)
G146190 NA other downstream 5096944 2097570 ~ 2111265 (-)
G149474 NA other upstream 8990 7229791 ~ 7232783 (-)
G149923 NA other upstream 753767 7974568 ~ 8024244 (-)
G150328 NA other upstream 1472597 8693398 ~ 8693743 (-)
CI01000028_09469357_09494746 NA other upstream 2256044 9469343 ~ 9494746 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) G125708 NA non-coding NC_053123.1 CM020920.1 20691897 ~ 20697240 (-)