CI01000028_08574189_08576449


Basic Information

Item Value
gene id CI01000028_08574189_08576449
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 8574045 ~ 8576449 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000028_08574189_08576449.mRNA
ATGGACGAACAACCTGGTATTGAATTTTTGTCAAAACTAAATCTCTCTCACCTAAACGATGAGCAACAGACTTTTCTTGAATCTCCGATAGAATTGAAAGAACTAAAGGAGGCTTTAGAGTCATTGAATAAGGGTAAGGCACCTGGTCTGGATGGTTTACCCCCGGAGCTGTATTTGATGCTATGGGATCTAATTGGACCACTACTTCTCGACTCTATAAATTTTGCAATAGATACAGGTCATTTCGACAGAGATCAGAATACTGCCCTTATCTCTCTGGTTCTGAAAAAAGGGAAGAACCCCCTTTGCTGTTCAAGCTATAGGCCGATTTCATTAATTGGTACGGATGCTAAGGCACGAGGGGCAGTGTCATTTATTTATAACAGATTACTCAAGCAGTGCTGTGGCACACTCCCTATCACTACTATATGGGAAAAGGAACTGGCCCATTACAAACCAAACTGGGATTGGATTTGGAAAAATATTCCATCGATGTCTAAAAATCTTGCCCACCAACTAATACACTACAAACTCATCCACAAGGCTTACGCTACTCCATATGTCCTGCACAAAATGAAGCACTTGCCTACCCCTTTTTGCTTGCTTTGTAATTCAAATACCGTGAGGACCTATATGTTTTATGAGTGTCAACATATTGGTAAATTTTGGGAAAAGGTTTTTCAAGTCTTGACAGAGCTGTGTGACGTGGTTGTTTTTAAACATCCCAGTCTTTGTCTGTTGAATGATGATAGTGAGCTCAATCTGAATGTTAACCAGTGAAGGATCCTTCACACTGCTCTAACTGCGGCCAAAAAGATAATTTTTAAAATCTGGCATGAACCCACATCCCCAGCATTTAAAATGTGGCTTATAGAACTCAAAAATATTGCATTGTTAGAATGCACAACAGTGAGAATTAATAAA

Function

NR:

description
reverse transcriptase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000028_08574189_08576449.mRNA True 924 mRNA 0.40 2 8574045 8576449

Neighbor

gene id symbol gene type direction distance location
CI01000028_08523322_08527676 NA coding downstream 46369 8523193 ~ 8527676 (-)
CI01000028_08253171_08253926 NA coding downstream 319584 8252965 ~ 8254461 (-)
CI01000028_08209464_08209781 NA coding downstream 364264 8207732 ~ 8209781 (-)
CI01000028_07885954_07890507 NA coding downstream 683538 7884624 ~ 7890507 (-)
CI01000028_07643341_07644823 NA coding downstream 928629 7642217 ~ 7645416 (-)
CI01000028_08578132_08578857 NA coding upstream 1609 8578058 ~ 8580112 (-)
CI01000028_08696023_08698981 ZBED9 coding upstream 119368 8695817 ~ 8699183 (-)
CI01000028_08823968_08838447 NA coding upstream 247029 8823478 ~ 8839766 (-)
CI01000028_08879941_08885561 NA coding upstream 303392 8879841 ~ 8885703 (-)
CI01000028_09019298_09021471 NA coding upstream 440896 9017345 ~ 9023090 (-)
G150253 NA non-coding downstream 105530 8463568 ~ 8468515 (-)
G150233 NA non-coding downstream 157036 8416552 ~ 8417009 (-)
G150223 NA non-coding downstream 169738 8403820 ~ 8404307 (-)
G150191 NA non-coding downstream 174099 8336690 ~ 8399946 (-)
G150180 NA non-coding downstream 239432 8319816 ~ 8334613 (-)
G150281 NA non-coding upstream 6104 8582553 ~ 8616998 (-)
G150304 NA non-coding upstream 61391 8637840 ~ 8638112 (-)
G150307 NA non-coding upstream 70637 8647086 ~ 8647288 (-)
G150313 NA non-coding upstream 76213 8652662 ~ 8653073 (-)
G150316 NA non-coding upstream 77826 8654275 ~ 8656615 (-)
G149923 NA other downstream 549801 7974568 ~ 8024244 (-)
CI01000028_07527725_07535631 ARPP19 other downstream 1038302 7525962 ~ 7535743 (-)
G149474 NA other downstream 1341262 7229791 ~ 7232783 (-)
CI01000028_06969947_06983352 NA other downstream 1602148 6965064 ~ 6984084 (-)
G149329 NA other downstream 1872805 6699513 ~ 6701240 (-)
G150328 NA other upstream 116949 8693398 ~ 8693743 (-)
CI01000028_09469357_09494746 NA other upstream 900396 9469343 ~ 9494746 (-)

Expression


Co-expression Network