CI01000028_08823968_08838447


Basic Information

Item Value
gene id CI01000028_08823968_08838447
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 8823478 ~ 8839766 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000028_08823968_08838447.mRNA
AATATCTGCTCTTGTGTGCTCTCTTCTCGAGTATGAGAGTTAGACATCTGCACCCTGTGCTTCAGGTCCCGTGTTTGCTTTGACCGTGGGTATCACTGGCTAGAGTGGATTAAGAGGAGCTTGAGATGGGTGTTCCCGACTCCTAAGTCACTTTTTGGATCTGGAAGTTCGCTCTGCGATAATTTAAATAGAGACCTAAAAAAGAGAAAGAAGAAAGAAAAAATAAATAAAGATATGTGAACCACCATACATTCGCTATCTTAAGAGGGATGATGTGCACAGTGTGTATGGAATGTCTTGACGTGTACATGAGAAAACGTGCATAATTGGGGGTTTAAGTTTAAGCTCCGCTCTCGTTCGACATTCTTCTTGAAGGAAAGTGTTTGCACACGATGATCTCATGATATCCGTAAAGCTTGCTTGATTCTTTTGGTATACATGTGATATTTTCTGACGCTTTCTAACTTTGAGGAATTGGATACTGTTTATATATTTATAACAAATTTAGTCTATCACCCACACAGTGTTATACTTTTCTGGTTGATTTTATAGTTGCATTTACCCCTGAGTGTTAAATATTAAAATGGTCATCTGTCTCTGATGAATTTATATATGTTGAATAGAGCATACTCAGTTTATCATAAACTTGGGACAGGCAACCCCCCATAAAGACATATGAGTGGATTTAACCCTAAGAGTTAAAAAAAAAATGTGTGTGTGTATATATATATATATATATATTGAATTCCTCCTGACCACGAAATAGGCCCTCCGTGCCACCAAGCAAATGGCCTGTGCAACTGGCCATTCTATGGCTGATATGGTCAGGGTTGGGGAGTATCAGAATACATGTAACAGTGTTACATAATCAAGATACAAAAAACTGGTAACTGTAATTTTTTTTTTTTTTTTATATGTAAATATAACAAAACAAGTAATCTGATTACAGTTACAATACTATCAGGAATACTCTCAGGATTACAATGGTTTCATTTAAAAAGTGATCATTCTAAAACAATTTCAGTAAAAAAAAAAAAGTTTGCAGTCTCACTCAGAAATGCATTATATAACTGTTTTTTTTTTCCACTAACAGTATAATGTAACTTCAAAATCTCTCCTGTATTTTCCCATTCCAAAGTCCAGACCAAATCAATTGGTTTCTGTTGGAAAGAGAGCAATGGCAAATATTTTATTTTATACATTACAGTTAATTATTTTGCTTTTTGGACAGATATTTTTACATTTTGTATTGTAAGAGAGGATAAGGGGCACCTTGTCTGAATTTCTCAATATGTTTGTCCTTGAAATGAGAGAGAAAAATGAATCCAGCTGGGGTATTGACAGAGATTACTTGTAAAGAGCTAAAGATAATAATGCTTTACTTAAGAAGGAAAACCAAAGCCCTCATAACTCTCCGCTCCTTTCTGGTCTGCGGGAACATTGAATGCTTGCCTGTCAGTCATCGTAATGATACTAAACCTAGATCCAAGATACCAGAACGCTTACTTGTCCAGTTGTGCTGCAGAATCTCCCAGCTCTATTTAGCATCTACAAAATGGACATCAGCGCTGATTAGCACTCGTATTAAACCCAGCACTGTCCATTTCTCTATTGCAAGGATTGTTGGATGGGCTGAGGCAAAGGAGGATGCTGGAGATGATGCTGGGTGTCTTGCTGGTGGACGCGAGGGTGAGTGTATGTTGCTGAGACTGCCCAGTTCTGAGGAATCGGACATCCTAAGCATCGGTGCGGGCGACTTGAGTGTCTCGCTAGCCCTTTCCCCACAGTATGAGGAGCCTGCGGAGGTTTTAACTCGTGCTGTGGCAAAACTTAATATTAACTGGCCGGCTGAGAAGCGGGAAGCATTCAAGAAAAGATAGGTGAGCGCTTCCTACGGTCAAAATCACAGCCTCCACATCTGGGTCTGCCATTCTTTCCAGATCTTCACACTGAGGTGTAGAGATCCTGGAAGAAATGTTCCCCTCACGTCTTCCCACAGTTTATAATTCTTCGATCATGGGGCTTGGGACGATGCCCAGTGCTGAAGAGAAACTAGCTGCAAATCTCTTCCCTGACGTGGAGTCATCCCTGAAAACCCTGACATTGCCTAGCCTAAACATAGCCATGCTGTATAACATTTTCACTGGTGTTCAAGGCATATATGGTGGCAGGCCAGGCCTACATAGGGACCTGGATGAGGGCCAAGGTGTGATTTATCTCTCCGTGCCACAAAGGAGACAGCTCATGCCATCAGCCGCTCCATGGCAGCAATGGTGGCCACAGAGACATCTCTGGCAGAGGTTCATTCCTCAGCACCATAGGTCGTGGGGGGCTGCTGCCAGGTCAGCTCCTTGTACCAGCAACAATAAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107667797

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000028_08823968_08838447.mRNA True 2370 mRNA 0.41 5 8823478 8839766

Neighbor

gene id symbol gene type direction distance location
CI01000028_08696023_08698981 ZBED9 coding downstream 124295 8695817 ~ 8699183 (-)
CI01000028_08578132_08578857 NA coding downstream 243366 8578058 ~ 8580112 (-)
CI01000028_08574189_08576449 NA coding downstream 247029 8574045 ~ 8576449 (-)
CI01000028_08523322_08527676 NA coding downstream 295802 8523193 ~ 8527676 (-)
CI01000028_08253171_08253926 NA coding downstream 569017 8252965 ~ 8254461 (-)
CI01000028_08879941_08885561 NA coding upstream 40075 8879841 ~ 8885703 (-)
CI01000028_09019298_09021471 NA coding upstream 177579 9017345 ~ 9023090 (-)
CI01000028_09035121_09057360 NA coding upstream 194813 9034579 ~ 9057965 (-)
CI01000028_09097962_09100854 NA coding upstream 258196 9097962 ~ 9100854 (-)
CI01000028_09159785_09161996 NA coding upstream 319983 9159749 ~ 9162816 (-)
G150368 NA non-coding downstream 76558 8746716 ~ 8746920 (-)
G150315 NA non-coding downstream 164754 8657945 ~ 8658724 (-)
G150316 NA non-coding downstream 166863 8654275 ~ 8656615 (-)
G150313 NA non-coding downstream 170405 8652662 ~ 8653073 (-)
G150307 NA non-coding downstream 176190 8647086 ~ 8647288 (-)
G150524 NA non-coding upstream 29850 8869616 ~ 8869891 (-)
G150568 NA non-coding upstream 121159 8960925 ~ 8964273 (-)
G150610 NA non-coding upstream 202570 9042336 ~ 9042797 (-)
G150833 NA non-coding upstream 298608 9138374 ~ 9195957 (-)
G150867 NA non-coding upstream 371451 9211217 ~ 9211476 (-)
G150328 NA other downstream 129735 8693398 ~ 8693743 (-)
G149923 NA other downstream 799234 7974568 ~ 8024244 (-)
CI01000028_07527725_07535631 ARPP19 other downstream 1287735 7525962 ~ 7535743 (-)
G149474 NA other downstream 1590695 7229791 ~ 7232783 (-)
CI01000028_06969947_06983352 NA other downstream 1851581 6965064 ~ 6984084 (-)
CI01000028_09469357_09494746 NA other upstream 637079 9469343 ~ 9494746 (-)

Expression


Co-expression Network