CI01000028_08879941_08885561


Basic Information

Item Value
gene id CI01000028_08879941_08885561
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 8879841 ~ 8885703 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000028_08879941_08885561.mRNA
AGTCATGTCATGCCTACACAAGTGGATCTGTAATAGCAGTAATTCAGATTTGTTTCACTGATAAACTTGTAGTGGTTTTGTGTGCAGGAATTGTGTGTGTGTTTACCTACAATAAGGATGACTAGCTGTTTGGTACCCAGCAATGACTGCAGTTTGTAATCATCTGCTTTCTCATTTGCTTTCCAGGAGATTTTCACCACAGTCTCTATACAGTTGTGCAGCTGTAATCAAGAACCAGAGAACAGCTGCTTTCCCCAAGGGCCTTCTCCAGACATACCAGCAGATTAGTGCAGTAGGCATTAGTGTGGTGCGCTCGAACCCTTTCCCTGAAATTAAGACACTCAGTTTCAATGTCACAATGCCAGACATGTCTCCGGAGCAGCCAAGGAGCCTGAATCCTCCGGCTAACTCGAACAATGATCTCCAGTGGTCCGAGATATGCACCGTAAACCAGCCGGCATTCCTGGACACAATTACAGAACTGAGCCATATGGGCCTATCTAAAACACCTACACAAAGCAAACAAAAGCCTTGACTGTTCGAAGACAAGGGAACTCTGATCGCTGGCCTTGTCACCCCTGCAATCTCCTCCCTGAGTAGCGTTCAAATCATATTATCATAGTTAACTCAATAAA

Function

NR:

description
hypothetical protein cypCar_00045695, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000028_08879941_08885561.mRNA True 635 mRNA 0.45 3 8879841 8885703

Neighbor

gene id symbol gene type direction distance location
CI01000028_08823968_08838447 NA coding downstream 40075 8823478 ~ 8839766 (-)
CI01000028_08696023_08698981 ZBED9 coding downstream 180658 8695817 ~ 8699183 (-)
CI01000028_08578132_08578857 NA coding downstream 299729 8578058 ~ 8580112 (-)
CI01000028_08574189_08576449 NA coding downstream 303392 8574045 ~ 8576449 (-)
CI01000028_08523322_08527676 NA coding downstream 352165 8523193 ~ 8527676 (-)
CI01000028_09019298_09021471 NA coding upstream 131642 9017345 ~ 9023090 (-)
CI01000028_09035121_09057360 NA coding upstream 148876 9034579 ~ 9057965 (-)
CI01000028_09097962_09100854 NA coding upstream 212259 9097962 ~ 9100854 (-)
CI01000028_09159785_09161996 NA coding upstream 274046 9159749 ~ 9162816 (-)
CI01000028_09224491_09231508 NA coding upstream 338102 9223805 ~ 9231845 (-)
G150524 NA non-coding downstream 9950 8869616 ~ 8869891 (-)
G150368 NA non-coding downstream 132921 8746716 ~ 8746920 (-)
G150315 NA non-coding downstream 221117 8657945 ~ 8658724 (-)
G150316 NA non-coding downstream 223226 8654275 ~ 8656615 (-)
G150313 NA non-coding downstream 226768 8652662 ~ 8653073 (-)
G150568 NA non-coding upstream 75222 8960925 ~ 8964273 (-)
G150610 NA non-coding upstream 156633 9042336 ~ 9042797 (-)
G150833 NA non-coding upstream 252671 9138374 ~ 9195957 (-)
G150867 NA non-coding upstream 325514 9211217 ~ 9211476 (-)
G150869 NA non-coding upstream 326885 9212588 ~ 9212787 (-)
G150328 NA other downstream 186098 8693398 ~ 8693743 (-)
G149923 NA other downstream 855597 7974568 ~ 8024244 (-)
CI01000028_07527725_07535631 ARPP19 other downstream 1344098 7525962 ~ 7535743 (-)
G149474 NA other downstream 1647058 7229791 ~ 7232783 (-)
CI01000028_06969947_06983352 NA other downstream 1907944 6965064 ~ 6984084 (-)
CI01000028_09469357_09494746 NA other upstream 591142 9469343 ~ 9494746 (-)

Expression


Co-expression Network