G149474



Basic Information


Item Value
gene id G149474
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 7229791 ~ 7232783 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU169776
AGCTCTCGACTATAATACAGTGCATTTACAAAGTTCACAAAGCTAATATAACCCTGAAATGGATATTTACAAGATGTTCGTCATGCATACTGCATGCATGCGTCGGATAATGAAATGTATGTGATCGTCTGTGTGTGAAAGCTGCTCTAACTCAGCTTGTCTCCTCCTCAAATCAGCAATCTCCTGCTCCAGTCGTCCTTCAGCTTGACTCACTGCAGCCTTTTTCTGATCTCTGATCAGCCGTGTCACCTCAGAGCGGTTTCTCTTAATGGAGCGGATTAACTCTGTAAAGATCCTCTCGCTGTCCTTCACTGCTGCCTGTGCAGAGCGCTGTTAGGACACACATTACAATCAGCATGTGATCCACAATGGGCTTCAGTGGGACTGCAATGTCTTCAGCTCTGGAGGAGAGTCTAAACAGTATGTCTTTTAATCCAATAGCCAACGGTTGTTTTTCTCCTCCCAATACTCACCTTATGACACTCAACAGCCTCTCTCCGCTCCTGAATATCTTTTTCTTGCTCCTGAATTCTCTGCTGGTATTTTATCTGTGTTTCTCTATTGAACACAGAAGAAATAACCATGAAAAAATATTTCATAAAAAAGAAATTACAAAATCATCATGTAAAATGTTGTATAAATATTATATTGGTGGCTTTGCCAGAGGTACGAGACACAAGCAAAACTGATGACCATGTAGATACAAGTCGATTGCAATTGTTGTGTGTGTGGTGTGCAAAAAGTTGTGTCTGTATGCTGTGACTCACCTGTTATTTAAAGGGGACCTATTATGCAAAATTCACTTTTGCATGGTGTTTGGACATAAATATGTGTTGGCAGTATGTGTACACAACCACCCTATAATGGTAAAAATAAATTTTTATCATTTTAAATGATAAAAAAATTATGGGGATTTTTTTTTAATCCCCATAAATCATAAGCAGTGTCTCAGAACAAGCCCTGGCAGTGTGACATCACAAAAGCCACAGGCCCCGCCCACAAATGTTGACAGACACTGACGATTAAACATTGAACCGCCCTGAGCGCATTCACAGCAAGTCCGCCATTGCTGCACTGACAAGAATGTCTCCCAAGCGTTTTAGGTGTTCTGTAGCTGGATGGATTAATCCACACAGCTCTCTCCATTTACTCCCTAAATCTGAGCCACTGAAAACGAGGTGGATTAACTTGGTTTTCCAGGAAAATGCTCCCTCAGTTCTGCCGAAATTCGTTTATGTCTGCGCGAATCATTTCACACCGGACTGCTTAGTGAACGAATATGAATACAAAGGGACAATACAAAACAGAGACAGTGCTAATAATGTGCTACTCAAGGATATACAAGTAAACATTGTTCGTGATCCAGCTTACAGTCTCCAGAGTGATACTGGATACGGCAGTAATGAAGGTGAGAGCACTTTATTACAGTTCATCGGAGTTGATTTACGGATATAAAGTTTACAAGTTTATTAAGCACCATCTGAAAAGGCATAAGGTCTTTATATATTTGTTTACTGTTAGTTGTAATGAGTGTTTCTGTGTAATTCACTGTGTATGTTGATGATAATGCAAGGGAGAGAGAGAGAGAGTTTATGGATAATATTTTATCCATTTTATCTGTATAGTTTTGGCCATCATTCGGATGGTACAACAGGCTTGTAGTAATATAGTGGATAAAAACAAGACAATATAAGTTAGAACCGTAATTTAACTAAACTGTGCCTGTTCTATCTCCATGCAACATGTGTTTGCAGTTTCTGACATTATACAGGTGCTGGTC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU169776 True 1780 TUCP 0.40 2 7229791 7232783

Neighbor


gene id symbol gene type direction distance location
CI01000028_07209430_07220674 NA coding downstream 8990 7208209 ~ 7220801 (-)
CI01000028_07189923_07200164 NA coding downstream 29534 7189276 ~ 7200257 (-)
CI01000028_07148224_07150338 NA coding downstream 79299 7147894 ~ 7150492 (-)
CI01000028_07124749_07145384 NA coding downstream 82682 7122715 ~ 7147109 (-)
CI01000028_07102169_07103695 NA coding downstream 126074 7102127 ~ 7103717 (-)
CI01000028_07236259_07242539 NA coding upstream 3416 7236199 ~ 7242940 (-)
CI01000028_07257403_07298334 NA coding upstream 24394 7257177 ~ 7298334 (-)
CI01000028_07328793_07405548 MYO5A, MYO5AA coding upstream 95539 7328322 ~ 7406679 (-)
CI01000028_07424181_07428224 NA coding upstream 191182 7423965 ~ 7428549 (-)
CI01000028_07527725_07535631 ARPP19 coding upstream 293367 7525962 ~ 7535743 (-)
G149480 NA non-coding downstream 1748 7170936 ~ 7228043 (-)
G149606 NA non-coding downstream 34240 7195141 ~ 7195551 (-)
G149554 NA non-coding downstream 113482 7076989 ~ 7116309 (-)
G149567 NA non-coding downstream 117366 7105656 ~ 7112425 (-)
G149535 NA non-coding downstream 176327 6992080 ~ 7053464 (-)
G149632 NA non-coding upstream 20011 7252794 ~ 7253110 (-)
G149637 NA non-coding upstream 60809 7293592 ~ 7293796 (-)
G149467 NA non-coding upstream 92017 7324800 ~ 7326970 (-)
G149657 NA non-coding upstream 139254 7372037 ~ 7373033 (-)
CI01000028_06969947_06983352 NA other downstream 257894 6965064 ~ 6984084 (-)
G149329 NA other downstream 528551 6699513 ~ 6701240 (-)
CI01000028_02441408_02445596 RPL35A, GM10247 other downstream 4783478 2441332 ~ 2445596 (-)
G146238 NA other downstream 5069753 2147378 ~ 2160038 (-)
G146190 NA other downstream 5118526 2097570 ~ 2111265 (-)
G149923 NA other upstream 741785 7974568 ~ 8024244 (-)
G150328 NA other upstream 1460615 8693398 ~ 8693743 (-)
CI01000028_09469357_09494746 NA other upstream 2244062 9469343 ~ 9494746 (-)

Expression



Co-expression Network