G150316


Basic Information

Item Value
gene id G150316
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 8654275 ~ 8656615 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU170715
TAAAACAAGGCTGAATTTGGGCTGTCAGTGAAAATTTAATAGACGTCTAACCACAGCCCAAGAATAGACTTGTATAGATGTCATCAAATATACAGCTAATGAATGACTACATGTAATAAACAACAAAATAATGGCTAAAGGATTCTTTTCACTTAAATATAACAGGTTCTCATAAATGGCACTCCAACCAAACAAATTACATATAGAAGGTTTTATTTAGAAAAATAACAATACAAAATGATAAAAAAAATAAATAAAAAATAAAAGAATGAAAATTACATTTTACAAATACAATACAATTAAATATAAACATTTAAAAAAAAAAAAAAAAATGGAACATTTAACAAGCAGCATTCAGTCTTTATGTACCATATATCTGGAACAAACTCCCAGAAAACTGCAGGCCTGTTGCAACTGTTTTTTTTTTTTTTTTTTAATGCAAGACTAAAAACTTTACTGTTTGCCACTGCCTTTTATTAATTGGAATAATAATTAATTTATTACACTGCACTAACTTTTACTCTCCTGTTTTTTCTTGTTTTTATTTTCTATTTAGCTCTTTTAAAGTGTTTTCAAATGTTGTCTTATATTGTCCTTTTATATTGACCTATGTTGCTGTTATGTTTTATGTAAAGCACTTTGAATTGCCTTGTTGTTGAAATGTGCTATACAAAATAAACTTGCCTTGCCATATCAAAAACTCATATTTTCATATCATAATGATCTAAAGATTAAAAGATATATGTGGTTTTCATAACATATAATAATAAGTTGCACAGGTTTCATGTTTACCCCCCTGAATTTAGTTAATTAGAGACTTTAAGGGCACAAGGAAACACTACAGTAGGCCTATACGTGCATGTAGCATGTTAATCTAACCACAACCTGGCTTACGCTGAGTCTGCACTGTTACCCGCTAAAATGTCACGATTCCTACACAATAACAAATAATAAATAATGAACATATGTCAAAACGAAAAACAGAGATACTTACACGACCAAAAGCAGGAAAGAATTTGCTTTAAAGTTTGCTGTTGCTTGCTCTCCGACAGTTGTTTATCGCGAGATCTGGCAACAGTGATCTCAACTAACTTTCAAGTCTCGCATTGCCAGTAGTCATGTCTGAGTAGGGCCACAGTTGCCATCTAGCGGTTGAGAATTGTAATTGTATTTTTATTTAACTTAAAATTAAAGGGGTCATATCATGAAAATCTGACTTTTCCCGTGTTTAAATGCTATAATTGGGTCTCTGGTGCATCTACCAGCACAGAAAATGTGGAAAAAGGACAAACCAGTAACTTGGTAAGCCTTTCTCTGCAAGCACGAGACAAATCGAGCCGTTCTGATTTCGCTCCCCTTGTGACGTAGGAAGGGGATCTTATAATATTACTGCCCCCTGAATCTGTGTTTCCACCCATGGCGCCGCCATTGTTTTCCCAAGAAGCGAGTAACACTTGTCCTGGAGTGCAGCAGCACCAGCTGTCCTGCAGTTTAGATACAACCCTGATCAAACACACTTGAATGTCTTCAGGATTACTAAAGCTACATGAAGGAAGGTGAGTTGTGTCAGAGCAAAACTGCTGCAGGACAGCAGCACTCAAGAATGACCGTCCCTGAGCTCTTGATATGGCTCAGCTATGTAAACATTATCACTGATCTGTTAACGGTTATAATAGCAAACATATAAGTCTCCATAAACTCCCTGGCATCTGAGCCACTAAGGACGCAGTGGTGCAATTTTATTTATGAAGGGAATGTGGTTAGATAAATTCATATAGCAGTATGTGTAAGTCATTAACACTAGAATGCTTCCCACGATCTTCAGTAAAACACAGGATTTGCACATAAATTGATTCTCAAAGATTTTGATTCTCAAAGAATTATTCTCAAAGATTCTCTGTGTTTTACTGACGATCGATCCAATTTCATATATTTATTTTGTTATGTTTGCAAATTGTCTTCCTGAATGTGTTTAGTTAGCATGTTGCTAATGTACTGTTAAATGTGGCTAAAATTACCATTGTTTCTTACTGTATTCAGAGACCAGAGTCATTTCGTTATTTTCATTTTTAACCCAAAAACGCGTGTAGTTTGTATAATTCATGAACGCATCTCCATTCTTATTGATTCTCTCCAACAGTGTGTAGCTTTAGCCACGTTAGCCATGCATTACGCTATCAAAATCATTCAGAATCGAATTTTAGCAAACATCCACAAAATACATGCCATACCTATGTTATATGCTGCATCAAGAATAGTTTGTAATGATCCATTTTGCGAGTTATATTTGCTGTGTTAGCTTCAGTATTATGTATGCCTCAGTGAATTGGAATGAGGAGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU170715 True 2341 lncRNA 0.35 1 8654275 8656615

Neighbor

gene id symbol gene type direction distance location
CI01000028_08578132_08578857 NA coding downstream 74163 8578058 ~ 8580112 (-)
CI01000028_08574189_08576449 NA coding downstream 77826 8574045 ~ 8576449 (-)
CI01000028_08523322_08527676 NA coding downstream 126599 8523193 ~ 8527676 (-)
CI01000028_08253171_08253926 NA coding downstream 399814 8252965 ~ 8254461 (-)
CI01000028_08209464_08209781 NA coding downstream 444494 8207732 ~ 8209781 (-)
CI01000028_08696023_08698981 ZBED9 coding upstream 39202 8695817 ~ 8699183 (-)
CI01000028_08823968_08838447 NA coding upstream 166863 8823478 ~ 8839766 (-)
CI01000028_08879941_08885561 NA coding upstream 223226 8879841 ~ 8885703 (-)
CI01000028_09019298_09021471 NA coding upstream 360730 9017345 ~ 9023090 (-)
CI01000028_09035121_09057360 NA coding upstream 377964 9034579 ~ 9057965 (-)
G150313 NA non-coding downstream 1202 8652662 ~ 8653073 (-)
G150307 NA non-coding downstream 6987 8647086 ~ 8647288 (-)
G150304 NA non-coding downstream 16163 8637840 ~ 8638112 (-)
G150281 NA non-coding downstream 37277 8582553 ~ 8616998 (-)
G150253 NA non-coding downstream 185760 8463568 ~ 8468515 (-)
G150315 NA non-coding upstream 1330 8657945 ~ 8658724 (-)
G150368 NA non-coding upstream 90101 8746716 ~ 8746920 (-)
G150524 NA non-coding upstream 213001 8869616 ~ 8869891 (-)
G150568 NA non-coding upstream 304310 8960925 ~ 8964273 (-)
G150610 NA non-coding upstream 385721 9042336 ~ 9042797 (-)
G149923 NA other downstream 630031 7974568 ~ 8024244 (-)
CI01000028_07527725_07535631 ARPP19 other downstream 1118532 7525962 ~ 7535743 (-)
G149474 NA other downstream 1421492 7229791 ~ 7232783 (-)
CI01000028_06969947_06983352 NA other downstream 1682378 6965064 ~ 6984084 (-)
G149329 NA other downstream 1953035 6699513 ~ 6701240 (-)
G150328 NA other upstream 36783 8693398 ~ 8693743 (-)
CI01000028_09469357_09494746 NA other upstream 820230 9469343 ~ 9494746 (-)

Expression


Co-expression Network