CI01000029_02860076_02868432


Basic Information

Item Value
gene id CI01000029_02860076_02868432
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 2858909 ~ 2868937 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_02860076_02868432.mRNA
GTATTAAAATGTGAATTTAAAACATTGAACTTTGACTATGAATATCAAGCAGTTGATAGTCATAATCCATCCAAAAATAAATCATTTACTCACCCTTATGTTCTTCCAAACCTGTGTAACTTTCTTTCTTCTGCATAATCACATATATTTCGAAGATGTTTATTTTTTTTTTTTTACCCATACTATATATATATATATATATATATATATATATATATATATATATATATATAAACAATTCTACAATTCAGTCAAACGTACAAAAACAGCGCTCTACAGGATGCAAGTTAAATATAGCCTTAATATAAAATTATTAAATTTAACATAGCCCAATTCAATTTGCTCAGGAACAAGTAATAGATTAATAAGATGAAAGATTGCCCGTTTTATGTACCCAAAATGAATTATATCTCATGTTTAACCACTGTAAGAGCCAGCGGCAAATCCCCGAAGCACTGGCCGAGATTAAGCTGTTCTTAGCGGGTACACAAGCACTGAACAGCCGCTGACGGCCTGGAGCTCACATCTCCGGAAACGTCTAAACTAATTGTAAAATAGGCACTATGATTAAATATGAGCCACATATTTCAGGTCTAAACAACTACATTATCGCCTAAAAAAACTCTTTAAACGACAATTCATGGTATGACAAGTGTAGTATTTTTAAAAATTATGGTGGATTTGCTCAGCTGCCATGACAGTCGCTTCAAGCGGAGTGATACAAACGGTGAAAAGGTAGGAGTGCTGTTATCACTGGAATATTGCACGGCTCTCAGTCAGATTTGAGAACCAGAAAGAACTGTTTCTTACACATATTCTGTCAAAAACACAACAGACACTGCGACAGAAGATGACAGGTCGACAGGACTTGATGTGACTCTAAACAACTTTTAAGTGTCATTCGTTGGCCTCCAATGTTATTAACTAGGTCAAAACCCTCTTTCACAGGAGCTCTTAGGTATGGCAATACTTCAGGAAATGATTTTAGATTCACCTTTGACTGTTCTGTCCTAATCTGTGTCCTTTCTTTGGCAGAGAACTGAAAACTTTTTCAACATTGTGTCATCACTCAGAAAGAAATGCTTCACCATCAAACTGTCTCTTCACCTCATCTCCTCCTGGAATGGCTTACCTTCTGACACAAAGCACTGGCAGGGCAGAGCATGAATGACTCTGGAGGTGATTGACACAGGAAGAATGTGTGACGGAAATGAAATTTCATTTGGGATGACGCTCTTTTCATGTCGCTTTTTCATTCCCCGTGGAGGGTCTGCCTTCCCACAAAGACCCTGTACTACTCTTCCACAGTGTCTAGACTGTCATTATAGTGTTCATCCTGTCAGGGTGTCAGAGGAAATAAGCGACTCGCAGGTTCCCGTGGCAGATGAAACTGCTCTTTGCAGCTTGCTCAGGATGAATCTTGGTTTAATCTTCCACATGAAGTGTGTGCGTCACCATATCGGCATATCAAAGAAGCATCAGCTCTATTTTGGGTCTGATATAATTTCATTCGTGCAGGTTAAGGGTTCATTCACCTCTCCCATCCACTGCCTGTTCGGAGAGCAGTGACCTTTAAGAGCTAAATGACTTAATCCTGCCACCAATTAAAGGAGTGAGAATCATGGACTACATCTTTGGCAGTCAGGCTTTACCTTGTCTCAAGATCATCTGTATTCCATCTGTCCCTCTAAAGGTCTCAACCACTGAACTTTTAAAAAATTTGATGGTGTGTGAATCATCCTTTGCCACTTCATTGTTTTTCTTCCTCTGTTTATTATGCTCCACTATACCAACACATTAAGTATTCACCTTATATTTTTTCAGCAAATATAACCAACTGATTAAAAAAAAAATCATTTTCATAGGGGGCACACTTTTTTATGATCTGAGAAACAGACATTTACCAAAACAATAACATTCCGTATTTATTGAAACTGAAATAGACCAAGTTCTATATTAAAACAACACCAAAACACAAGATAGTCCATCCTACTACACCAAAACCCATTTGCATTATGCCTATAGCCTACATTTCGTAAACATGAGTCACAATTCCACCAACAACACAATAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_02860076_02868432.mRNA True 2074 mRNA 0.38 4 2858909 2868937

Neighbor

gene id symbol gene type direction distance location
CI01000029_02772065_02813214 TBC1D32 coding upstream 44418 2772065 ~ 2814491 (+)
CI01000029_02750295_02751549 NA coding upstream 107351 2747982 ~ 2751558 (+)
CI01000029_02684591_02727897 NA coding upstream 130742 2682519 ~ 2728167 (+)
CI01000029_02583370_02587687 SERINC1.L, SERC1, SERINC1, SERINC1.S coding upstream 271212 2583370 ~ 2587697 (+)
CI01000029_02488613_02490983 NA coding upstream 367882 2488350 ~ 2491371 (+)
CI01000029_02904113_02950205 NA coding downstream 34843 2903780 ~ 2951323 (+)
CI01000029_02956475_02956765 NA coding downstream 86951 2955888 ~ 2970825 (+)
CI01000029_02976262_03013586 MAN1A1 coding downstream 107170 2976107 ~ 3013913 (+)
CI01000029_03166200_03260925 FAM184A coding downstream 297263 3166200 ~ 3260925 (+)
CI01000029_03266557_03286137 NA coding downstream 397546 3266483 ~ 3286145 (+)
G152446 NA non-coding upstream 122858 2735816 ~ 2736051 (+)
G152433 NA non-coding upstream 234162 2624445 ~ 2624747 (+)
G152432 NA non-coding upstream 235000 2623482 ~ 2623909 (+)
G152426 NA non-coding upstream 244626 2613991 ~ 2614283 (+)
G152424 NA non-coding upstream 248155 2610530 ~ 2610754 (+)
G152465 NA non-coding downstream 32723 2901660 ~ 2992153 (+)
G152522 NA non-coding downstream 183558 3052495 ~ 3052730 (+)
G153405 NA non-coding downstream 274050 3142987 ~ 3184240 (+)
G153423 NA non-coding downstream 322656 3191593 ~ 3201635 (+)
G152451 NA other upstream 95970 2761594 ~ 2762939 (+)
CI01000029_01526863_01527414 NA other upstream 1331010 1526754 ~ 1527899 (+)
G151495 NA other upstream 2486987 366541 ~ 371922 (+)
G151415 NA other upstream 2633664 170521 ~ 225245 (+)
G153475 NA other downstream 676188 3545125 ~ 3562004 (+)
G153790 NA other downstream 1864652 4733589 ~ 4740107 (+)
G154587 NA other downstream 2402083 5271020 ~ 5271535 (+)
CI01000029_05461497_05468985 BATF other downstream 2588304 5461497 ~ 5470346 (+)
G155079 NA other downstream 3413748 6282685 ~ 6288398 (+)

Expression


Co-expression Network