CI01000029_03166200_03260925 (FAM184A)


Basic Information

Item Value
gene id CI01000029_03166200_03260925
gene name FAM184A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 3166200 ~ 3260925 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_03166200_03260925.mRNA
ATGGCGACTGGAGCGGGCTGGCAGCATTACTACAACCCCGCTGGCAGCGCTTCGACGGGGAAATATAACAGCACCTCCACTTCAACATCCACCAGCACGTCCTTCCCGTCCGGTTTAACCCTCGAATACACGCAGGACCTCCACCTGAAGATGAGCAAGAAGATAGCACAGCTGACCAAGGTGATCTACGCCCTTAACACCAAGAACGACGAGCATGAAGCGGCCATCCAGACCCTAAAGGAGGCCCACGAGGAAGAGGTGCAGCAGATTCTCTCTGAAACACGGGAGAAGATCATGCAGTACAAGAGCAAGATCAGCGACGAGATGGACTTGAAGCGGCGCATTCAGTCCCTGGAGGAGTCCATGGAACTGCACGAGCGGATGAAGCGCCAGGCCCTGGCGGAGTTCGAGACGTACCGTCAGCGGGTGGAGGACATGCAGCTCTGCACAGAGGCACAGCACACGCAGCGTGTGGTCACCATGTCCCGCGAAGTGGAGGACATGCGACGTTCTTTCGAGGAGAAGCTCCGCTCCTTTGGACAGTTACAGGCCCAGTTTGAGCAGGAGAAACGGCAGGCTCTAGAGGAGCTTCGTGCCGCACATCGGCAGGAGGTCCAAGAACTGCTTCGTTCACACCAAAGCCAGAATGCCAACTACAACAAAGACCAGGAGAAACTGGGACAGCTTCATAAAGCAGAGGTGGATTCACTGACCGAAAGGGTCGAGGAACTGAAACAGGACAAGAAGCGTCTGGTGGAGGAGTACGAGGCCAAGCTAAATAAAGCCCAGGCCTTCTACGAACGCGAACTGGAGGCCATGAAACGCACGCAGCAGATGACCGCAGAGAACCTGCTGGCCTGGAAGAAGACCGAGGCGGAGCTGAGGAAGGAGTTCCAGGCACAGGAAGCAGCGCTCCAGAAGACTCTAGGGAAGCTACGCAGTGAACTGAAGCGGGTGCAGGAGGAGGCCAGGGAGAGCAGGGAGAAATCCCACAAACTGCAGGCTTCCCTCATTTCTGCGGAGAACAACATCAAGGAGCTGCATAAACAGTTGGAGGAGGTGACTAAGGACACGGAGATTGTGGAAATCAGGCAGAGGGAGGCGGAGTGTGAGCTGGAGGCGTCCAGAGACCGAGTGCAACAGCAGGCCACCGAGATCCTGCTCAAAGCCAGTCAGATCGGAAGCCTGCAGGCCACCCAGATGACTCACGAGGCGGTCATTCGGGATCTGGAATCGGAAAAGTCTCGTCTGAAGGACAAGGTGTTACGTCTGGAGGAGGAAAGAGGGGCATTGCAGAACAAATGTCAGACACTGGACGAGAGGCAGAGACAGCAGATTGTCTCCCTGGAGAAGTCACTTCGAGAGGAAAAGCAGATCTATGAGAAGGAGCTCATGAACTTGCGTGCCAAATATGAAGAGGACACTGCTCACTTTAAGGATACCCACAGTCGGGCAGTGGAGGAGCTCTCCAGGAAGCACCGGGCCGCTCTGGAGAACACCCAGAGTGTCTCAGAGAAAGAGAAGAACCGCCTCCTGTCCGAGATGGAGGATCAGTTCGAGAAGGAACGTAACTCTCTAGAGGAACAGAAGACCCTTTTGCGAGAGGAACTGGACAATCTACGAGAGGAGCTCACTGCTAAACTCAACATGGCCAACAGTGAGGTGAGTCGACTCCAGGAGCTGGTGAAGCAGGGAGAGCAGGGGCTCGGTTCTGCTGAGGGACACATCTCCAATCTGAAGGACGCCCAGAAGAAGCTTCTAGAAGAGCTGGATGCCACACGAGCCAGACTCCGAGAGACCAGCAACCTCCTAACAGCCCTTCAGGGAGAGATGGAGACTCAGAAACAACAGCATGATGCCAAACTCATCTCCACCAAAGAGGAAGAGAAGCTCAAAATGGATAAGATGGCCCTGGAGCTCGAGCTGAAGTGGACTGAGACACTCAGGCAAGAGTGTAAGAAACTGCGTGAGGAACTGCGTGAAGAGCATGAGGAGAATAAAAGGTCAGCGCTCACCCAGCTGGCACAGAATAAAGATCAGGAGATGTGCTCCGCCAGAGAGAGCTGGCAGAGGAAGGTGGAGGACCTCCTAGAGCAGATTTCCTTGCTGAAACAGAGCCTGGAGATGCAGCTTTCCCAATCCCAGCATTCCCTGCAGCAGTTGCAGGCACAGTTCAGTCAGGAGCGAGAGCACCTGGGACAGCAGCTGCAGGAAATGGAGCTGGAGCATCAGCGCAGGGAGCAGCGCCTGCAGGAAGCCCACTGCTGTGCTATACAGGACATGCAGGAAGCCCGCCAGCACGACCTGAAGGAGCTCGAGGAGCGTCTCCGGCAGCAGCACCACATGGAGCTTCAGACTCTGCGGGAGGCTCACAGGCAGAACATCGAGACTCTGAAACAGCAGTCAGAGCAAGAACTGCAGACTCTCCGCTTCGAACTGGAGGACGAGGGCAAGGCCATGCTGGCATCCCTGCGTTCAGAGCTGAACCATCTCCACGCGTCAGCCATTGAACACATGCGTCAGACCCATCAACAGGAAACAGCGGCTGCCAAACAGGAACTGGAGCGTGCTTTGGAGCAGAGCAGAGTACAG

Function

symbol description
fam184a Located in extracellular space.

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_03166200_03260925.mRNA True 2592 mRNA 0.56 13 3166200 3260925

Neighbor

gene id symbol gene type direction distance location
CI01000029_02976262_03013586 MAN1A1 coding upstream 152287 2976107 ~ 3013913 (+)
CI01000029_02956475_02956765 NA coding upstream 209312 2955888 ~ 2970825 (+)
CI01000029_02904113_02950205 NA coding upstream 214877 2903780 ~ 2951323 (+)
CI01000029_02860076_02868432 NA coding upstream 297263 2858909 ~ 2868937 (+)
CI01000029_02772065_02813214 TBC1D32 coding upstream 351709 2772065 ~ 2814491 (+)
CI01000029_03266557_03286137 NA coding downstream 5558 3266483 ~ 3286145 (+)
CI01000029_03291762_03308373 NA coding downstream 30837 3291762 ~ 3308793 (+)
CI01000029_03324084_03378615 CEP85L coding downstream 63159 3324084 ~ 3378615 (+)
CI01000029_03499444_03499713 NA coding downstream 238268 3499193 ~ 3500186 (+)
CI01000029_03511828_03527110 GOPC coding downstream 250903 3511828 ~ 3528842 (+)
G152522 NA non-coding upstream 113470 3052495 ~ 3052730 (+)
G152465 NA non-coding upstream 174047 2901660 ~ 2992153 (+)
G152446 NA non-coding upstream 430149 2735816 ~ 2736051 (+)
G152433 NA non-coding upstream 541453 2624445 ~ 2624747 (+)
G153430 NA non-coding downstream 135920 3396845 ~ 3490373 (+)
G153449 NA non-coding downstream 193385 3454310 ~ 3456618 (+)
G153461 NA non-coding downstream 223019 3483944 ~ 3484379 (+)
G153466 NA non-coding downstream 235366 3496291 ~ 3496522 (+)
G152451 NA other upstream 403261 2761594 ~ 2762939 (+)
CI01000029_01526863_01527414 NA other upstream 1638301 1526754 ~ 1527899 (+)
G151495 NA other upstream 2794278 366541 ~ 371922 (+)
G151415 NA other upstream 2940955 170521 ~ 225245 (+)
G153475 NA other downstream 284200 3545125 ~ 3562004 (+)
G153790 NA other downstream 1472664 4733589 ~ 4740107 (+)
G154587 NA other downstream 2010095 5271020 ~ 5271535 (+)
CI01000029_05461497_05468985 BATF other downstream 2196316 5461497 ~ 5470346 (+)
G155079 NA other downstream 3021760 6282685 ~ 6288398 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00004331 NA coding CM030121.1 CM030121.1 43295652 ~ 43317408 (+)