CI01000029_03499444_03499713


Basic Information

Item Value
gene id CI01000029_03499444_03499713
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 3499193 ~ 3500186 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_03499444_03499713.mRNA
AAATAAAAATCAAATAAAAACATAATTAGCGCCACAAGCCATTACAAACAGCGAGAGCTTTCGGAGGGGTGACAATGTAGAGCAATCAATTTACGCACTTAGAATTACAAACTTCAGGGTTTACTGCTAATTAGTGCCATTTGTGGCATGCACGCGCACATTCAAACAACACAATTACAAACAAACAACCATTTACAGCGCGCTTGGAAAGCCTTCATGGGAGCATGAAGTTGCAATAAGACAGACTGGGCATGCAGAAGATTCGTCGACTGGAAAACCCTCGCAAGTTTGCACCATCTGAAAGCAGCTGTGCAACTAGAGGCGCATTTAATTGGATAGTTCACCAAGAGTACATTATTCTGCTTCCCTCTGAAACGGCTCAAAAGTCACGCTGTGACAGACGGACGACTGTATGCAACTTCTGTAGAGTTCAGTGCACTGGCACAGACTGCCATCATTCGAATGTGTCCAGAGATATGGCAAAGGAAAAGAGTGACGGTAAAATTACACCATATGGCTAACCATGTTTCCTTTCATGTTCTTCGCGACCGGCTTGCTGGTGGGCGTTACTTAGGGCAGCGCTCGTGTCCTTTTCTGAGTGTAGTTACTCACGGGAGACTCACACATACACAAACATATAAGCATAATCACACACACATACACACAGGAGACGCCCAGCAGGCCTTGGCGGAGAGGAGCAGAGATGATCCGGGCGGAGAAGAGCAGCAGCAGCGTGTTGCTGGCGCTGAGGCTCCAGTGCTTGTACTGTAAACATGAAGAGAGGGATGAACCCTCTCCATCCCCTCTCACTCGTTCAGTTCCTTCTCTGTGCGGACCCAGTCCCAGTTACGCTCTCTGCATGCTGTTCCTCACTTGCCCAGCCGCTGCTCACACACCGCATAGCACTGCAAAGCACCGAACAGGTCGTCGTAAGAGACGTTTATGTGGGATGGCATTGAGCTACAGGTGGAGAAGACAGAAAAATGGAGATAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_03499444_03499713.mRNA True 994 mRNA 0.48 1 3499193 3500186

Neighbor

gene id symbol gene type direction distance location
CI01000029_03324084_03378615 CEP85L coding upstream 120578 3324084 ~ 3378615 (+)
CI01000029_03291762_03308373 NA coding upstream 190400 3291762 ~ 3308793 (+)
CI01000029_03266557_03286137 NA coding upstream 213048 3266483 ~ 3286145 (+)
CI01000029_03166200_03260925 FAM184A coding upstream 238268 3166200 ~ 3260925 (+)
CI01000029_02976262_03013586 MAN1A1 coding upstream 485280 2976107 ~ 3013913 (+)
CI01000029_03511828_03527110 GOPC coding downstream 11642 3511828 ~ 3528842 (+)
CI01000029_03640782_03646346 NA coding downstream 140596 3640782 ~ 3646364 (+)
CI01000029_03649051_03684709 IGF2R coding downstream 148865 3649051 ~ 3684880 (+)
CI01000029_03689026_03697933 SLC22A2 coding downstream 188840 3689026 ~ 3698074 (+)
CI01000029_03708374_03721140 NA coding downstream 208188 3708374 ~ 3721140 (+)
G153466 NA non-coding upstream 2671 3496291 ~ 3496522 (+)
G153430 NA non-coding upstream 8820 3396845 ~ 3490373 (+)
G153461 NA non-coding upstream 14814 3483944 ~ 3484379 (+)
G153449 NA non-coding upstream 42575 3454310 ~ 3456618 (+)
G153423 NA non-coding upstream 297558 3191593 ~ 3201635 (+)
G153504 NA non-coding downstream 70965 3571151 ~ 3571432 (+)
G153505 NA non-coding downstream 71655 3571841 ~ 3572070 (+)
G153509 NA non-coding downstream 88516 3588702 ~ 3594323 (+)
G153513 NA non-coding downstream 102404 3602590 ~ 3602834 (+)
G152451 NA other upstream 736254 2761594 ~ 2762939 (+)
CI01000029_01526863_01527414 NA other upstream 1971294 1526754 ~ 1527899 (+)
G151495 NA other upstream 3127271 366541 ~ 371922 (+)
G151415 NA other upstream 3273948 170521 ~ 225245 (+)
G153475 NA other downstream 44939 3545125 ~ 3562004 (+)
G153790 NA other downstream 1233403 4733589 ~ 4740107 (+)
G154587 NA other downstream 1770834 5271020 ~ 5271535 (+)
CI01000029_05461497_05468985 BATF other downstream 1957055 5461497 ~ 5470346 (+)
G155079 NA other downstream 2782499 6282685 ~ 6288398 (+)

Expression


Co-expression Network