CI01000029_07946659_07953611 (TSTA3)


Basic Information

Item Value
gene id CI01000029_07946659_07953611
gene name TSTA3
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 7946402 ~ 7953611 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_07946659_07953611.mRNA
AGGAATAATATATTTATCAATGACAACGTGCTGCAGACGGCTCATGAGTTCGGGGTGGTGAAGGTCGTTTCTTGCCTGTCCACGTGTATATTCCCGGATAAAACCACCTACCCCATAGATGAGACCATGATCCACAACGGTCCGCCACATGAGTCTAATTTCGGTTATGCCTACGCCAAACGCATGATTGATGTCCACAACAGGTCATGTTTTGAGAAGTATGGTCGGAGATACACCGCCGTTATACCCACCAATGTTTTTGGACCACATGACAACTTCAGCATTGAGGACGGTCACGTGCTGCCGGGGTTGATTCACAAGACATACCTGGCAAAGAAGGAAGGTAAACCTCTGCAGGTCTGGGGTTCAGGTCGCCCTCTACGGCAGTTCATCTATTCTCTGGATCTGGCTCGTCTGTTTCTGTGGGTTTTGAGGGAGTATGACGAGGTGCAGCCCATCATTCTATCAGTTCATATAGATTTGAATGACATATACTCCATCCTACATAGACTACAAACACATTTTCTATCATGTATGCCTATGAAAGACGATCAAGCCAATCGGAGTAGGTATGGGGCGGGGCTACACGTGCAGCCACGTCCCATTTGGAGGTGCAGCCAGGTGTACTTGGTTCAGACACTCCAGATTGTGCAAACTTTCTGGGGATGGAGCATCCATTCACCTGAAGACACATTGCCTGGGGACAGCATGTCTGCCCCTTGGTTCAGCTTGCCTGGCACGTGCAGTGCTCTTAACAAGCGAGTTGGAGAGGAGGATGAGTTGTCCATAAAGGACGCTGCAGACACTGTGGTTGAAGCGTTGGGGTTCAAAGGTGACGTGATTGTATCCTTCCACACTCAAACAATTAACTTCTCAGTGGTCATAGTGAAAATCTGCATAAGGTAGTTTCCAGATTGAGCTGTTGAGCTTCAAAAAGCTTCATAAAAGTAGTCCTTAAATGACAGAGTTTTCCTTTTGGTGTGAACTAATCCTTTAACCCTTAACTAAACGCTCTCAGTATGACACTAGTAAAGCAGATGGTCAATTCAAGAAAACCGCCAGTAACGCCAAACTACGCAAATACCTGCCAGACTTCAAGTTCACACCGTTCAAAGCAGGTGATCAATCTTCACTTCTCTGAAGAGCTTCAGCGTTTTAATAAA

Function

symbol description
tsta3 GDP-L-fucose synthase

NR:

description
GDP-L-fucose synthetase

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_07946659_07953611.mRNA True 1163 mRNA 0.46 7 7946402 7953611

Neighbor

gene id symbol gene type direction distance location
CI01000029_07850412_07853905 NA coding downstream 92385 7850180 ~ 7854017 (-)
CI01000029_07836385_07847829 NAPRT coding downstream 98573 7836247 ~ 7847829 (-)
CI01000029_07820703_07833528 RHPN1 coding downstream 112317 7820675 ~ 7834085 (-)
CI01000029_07810274_07813211 HLX1, HLX coding downstream 133191 7809978 ~ 7813211 (-)
CI01000029_07615776_07640353 MIA3 coding downstream 306049 7615200 ~ 7640353 (-)
CI01000029_08041274_08048935 NA coding upstream 87380 8040747 ~ 8049427 (-)
CI01000029_08083189_08089291 TBC1D7 coding upstream 129146 8082757 ~ 8089291 (-)
CI01000029_08092122_08094899 NA coding upstream 138056 8091667 ~ 8094899 (-)
CI01000029_08100383_08125091 NA coding upstream 146277 8099888 ~ 8125091 (-)
CI01000029_08178470_08183999 PSMG4 coding upstream 224809 8178420 ~ 8183999 (-)
G156736 NA non-coding downstream 16059 7929759 ~ 7930343 (-)
G156661 NA non-coding downstream 217197 7728966 ~ 7729205 (-)
G156659 NA non-coding downstream 227365 7718713 ~ 7719037 (-)
G156628 NA non-coding downstream 247526 7641036 ~ 7698876 (-)
G156633 NA non-coding downstream 292661 7643283 ~ 7653741 (-)
G156718 NA non-coding upstream 266779 8220390 ~ 8226568 (-)
CI01000029_08237701_08245368 FDFT1 non-coding upstream 282584 8236195 ~ 8245368 (-)
G156850 NA non-coding upstream 313789 8267400 ~ 8267662 (-)
G156851 NA non-coding upstream 317141 8270752 ~ 8271021 (-)
G156495 NA other downstream 576855 7365007 ~ 7371921 (-)
G156542 NA other downstream 775451 7170367 ~ 7170951 (-)
G154415 NA other downstream 2958977 4986108 ~ 4990990 (-)
CI01000029_04460778_04463540 FKBP1B other downstream 3469190 4460159 ~ 4463540 (-)
CI01000029_03698769_03707177 NA other downstream 4239150 3698572 ~ 3707883 (-)

Expression


Co-expression Network