CI01000029_08092122_08094899


Basic Information

Item Value
gene id CI01000029_08092122_08094899
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 8091667 ~ 8094899 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_08092122_08094899.mRNA
CAATTATTTGTCTTCAAATATCTCCATTCCAATTGGAAAAATAAAACTGATAATGTACACCATACCCTCATTCGATCATGCAACAGCAATTCCAACTAACCTTAGAGATTCACTATCATGTCTCGACGTTGTATGGTCTGATATGTTTGAGACTGGAGACTCGGTGAATGACTGGGAAGTAGCTATGACTGATTTTCTCAAAGGAGCTCCAGCACAGTGGCGGCATTTTAACACATCAGAGAGCTCGCCATTTGTAGAAAGGGATGTCTTTAAAAAATTAATTCAGTTAATTGAGAGAGAAAAAAGGAAAAGCTGTCTGATCACTGAAGTTTCTTTACAATACAAGCCTGGCAGTGGAGGGTCAACCCTCGCAATGCAGGTGCTTTGGCATTTTCACAAAGACCTCAGATGTGCCAGAGTGATCAACCCTGATTTAGATGCTAAAAAGCTGCCGAAACAAGTGGTGGACCTTTTTCTACTGTCTAATGAACAACATGCAAAACGTGATCAGAAAACTGTGCTGCTGTTACTAGACACAAAGGAAAACACAAACAATGATCAGCCAATCAAGAATACTCTCTGGGAAAACCTGATTGACGAAATACAGAAGAGGGACATCAAAACAGACACTCCAGCTGTGATCATTTTAAACTGCAGAACTGCAGACTTTCCAACAACAGGTAGTGTGGCAATTACAATGACGCTCTCTTCAACTGAGAAAATGAGGTTTGATCAAAAAAGGCAGGAGCTGGAAGAGAAATACAAGGAAAGGTCACAGAACTTTCACGCCTTTAACATAATGCAGGGAGGTTTCAAGGAAGAGGATGCTGAGAAAGTGATCACAGCAGAAATGGTAGAACACGTTAAAAATCATCCAAAGTCCAAAAGCACAAGACTTCTGAGTTTTTTGGCTTTGATAAATTCATACGTCCCAGGCTCACACTTGTCGAGGCTTTCATGCGAGGAATTCATTGCAAAAACAGGCCGGTCCTCCGATGAGGAAAACGCCCCACTGGAAACAACAATGAAGCCTTTCATGGATCTTATAGTCATATTCTCAGAGGGAAAACCTGTAAAAACCGACTACATACGCATGGTGCATCCAATGATTGCTGATGCATGTGTAAATATGCTCACTGTGCACAAACTGACAAGATTTGACATCGCTTCTGACTTCTTGAACAGCATGGTAAGAGGAAAGGAGAGGAATTACATGCAAATTTGCAAGAGAATGTTAACCGATAGGCTCGACACAGAAAAATGCAGGTTTTCAAAACTGATTCTTGACCTCTTGAAGGACAAGAGCAAGAATGACAAGAACAAGAATGACAAGAACAAGAATGACAAGAACAAGAATGACAACCAATGCACTGATTTGTTGAAGCTGGCTTCAGATTTGTTCACCAATGACCCTTTTTATCCTCAAGCACTTGCACGTTTGTATTACATTGAGGTAAATGAGGCAAACAAATATGATGAGGCCAAACGCTGGGCAAATATAGCCATTGACAGAGATCCCAAAAAATCTCATATTAGGGATACACTGGGGCAAGTTCACAAAAACCACCTGCGGAACACAAAAACATGGACAGACACAGAAACAGTTTTGAACATCGCGAAGTCTGCCATTAAAGCGTTTCAAGAGGAAGAGAAAGCAGCTGAAGACGAGTCAGAAGACAACACCAGTTTCAATAACAGGGGCTACTTTGGATTTCTCCAGGTTTGCAAGGGCATTTATGATTTGCCAAAAAAACCTCTTGAACAAAAATGCAGTAAATTCATCAGTGGTCTCGAAGTTGACGTTAAGAAAAGATATGATTTCTTTGAATGGTACCTGGCATTCTCAAGACCAAGGATCAATAAAAAGGATCCAGACTACTTTCAATATACTGTTGAAGAGTGCTACAAGCGATATTTTAAGAAGGAAAAGACTGACGAAGCCACCCTGAATGAGAAAAAAATGAAGTCTTTCGGAGGACTACTTCATTTCCTAAAACCTGATGTAAGTGTGCTTCAACAAACATTTAAAAATCCACAATCTGATGATGAAACCCAAAACATTCTCTACGTTCTTGCCAACATCATCCTGAGTATGTCTGACAAGCAGTCTGAAAACGTAGAAGAGCTCCAGGCCAGTTTACAGAAACTTTGGGTGAGCAAAAAACAAGGCAGAAGCCCGGAGTTTTACTTCTTGATCCTTTTGCTCTTTTGGTTTGATGAAGCGCAGCCAGGAATCCCAAACCCTCCAGACCTTGAAGACTGTGTCAAATATATGGGTGAGTCATATGAGAAGAAGTATCGGAAATACCTTCGCGGTCGCTACCTGGTGCCTCTGTTCTTCTTTGGGACAGAGAATGGCTTGCAGAGATTGGTTCACAGCTCAAAACTACAAACCACAAATCAAAATGATGATGTAGGAGCCTTGGAGTTCCTATTGGAAGGAGATGAAAATGTCAGTTGTCTCCAGCGTATCACCGGGGAGGTCAAGATGCATAATAAAGTGTTTGCTATAAGAGATGGGAAACAGATTCAAGTCACCCCTCACAAACCGGCCAGTGTGTACAAACAAGGCAAGGTGTCTTTCTACCTTGGCTTCAATATCAGAGGACCTGTTGCCTTCAGCATCAGATACACTGAGATACTAGTTCATGAATCATCTTCATGACATTCTTTTTGCGTTGACACTGGAAATGTTCAACAGTGCAGCTCATACAATGACAAAACGAGAAAGAGAGAGAGAGAAGGGAAAATACTTTCCTCTCAGCTGGATGTGAAAAAAGACAACATTTACCAAATCATGTTTATTTAGTAATCAGTATGATAGTTATATTAGAATTGTATGATTGTGGGGACTGTGGGGAATGTAGAGAACGGAAAATAAGTTAAAAAAATATTAGTTGTAATGCTGGTGGTGGGTCGGTAAGTTCAACCTATTTTTAATTGTTTTGACCACTAAATAATTTGGAAATTCACTTGAACATACTTTCATTAGAAGTTGTAATAACTCAAAAAGATTCATGCATTAATTTTGAGCCAAATGTATTGAGCCAAAACATTTGTTTTTAGAGTGTATTCTGTGGACTGGCCAGGAAAAACTCCAATACATTAACAAAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_08092122_08094899.mRNA True 3120 mRNA 0.40 2 8091667 8094899

Neighbor

gene id symbol gene type direction distance location
CI01000029_08083189_08089291 TBC1D7 coding downstream 2376 8082757 ~ 8089291 (-)
CI01000029_08041274_08048935 NA coding downstream 42240 8040747 ~ 8049427 (-)
CI01000029_07946659_07953611 TSTA3 coding downstream 138056 7946402 ~ 7953611 (-)
CI01000029_07850412_07853905 NA coding downstream 237650 7850180 ~ 7854017 (-)
CI01000029_07836385_07847829 NAPRT coding downstream 243838 7836247 ~ 7847829 (-)
CI01000029_08100383_08125091 NA coding upstream 4989 8099888 ~ 8125091 (-)
CI01000029_08178470_08183999 PSMG4 coding upstream 83521 8178420 ~ 8183999 (-)
CI01000029_08185095_08190376 NA coding upstream 90130 8185029 ~ 8190376 (-)
CI01000029_08205518_08214627 NA coding upstream 110571 8205470 ~ 8214627 (-)
CI01000029_08229070_08234969 CTSBB coding upstream 134066 8228965 ~ 8234969 (-)
G156736 NA non-coding downstream 161324 7929759 ~ 7930343 (-)
G156661 NA non-coding downstream 362462 7728966 ~ 7729205 (-)
G156659 NA non-coding downstream 372630 7718713 ~ 7719037 (-)
G156633 NA non-coding downstream 437926 7643283 ~ 7653741 (-)
G156718 NA non-coding upstream 125491 8220390 ~ 8226568 (-)
CI01000029_08237701_08245368 FDFT1 non-coding upstream 141296 8236195 ~ 8245368 (-)
G156850 NA non-coding upstream 172501 8267400 ~ 8267662 (-)
G156851 NA non-coding upstream 175853 8270752 ~ 8271021 (-)
G156852 NA non-coding upstream 176550 8271449 ~ 8271686 (-)
G156495 NA other downstream 722120 7365007 ~ 7371921 (-)
G156542 NA other downstream 920716 7170367 ~ 7170951 (-)
G154415 NA other downstream 3104242 4986108 ~ 4990990 (-)
CI01000029_04460778_04463540 FKBP1B other downstream 3614455 4460159 ~ 4463540 (-)
CI01000029_03698769_03707177 NA other downstream 4384415 3698572 ~ 3707883 (-)

Expression


Co-expression Network