CI01000029_08425310_08441838


Basic Information

Item Value
gene id CI01000029_08425310_08441838
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 8423797 ~ 8441847 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_08425310_08441838.mRNA
GCATATATGGCCAGTTGAATAAAATTAAATTCTGCATTCTATAATAATCCTGCAAAAGTTGCATGGAAAAGTTATTCTTTTCAGAGCAAACACCACAAGACTAGACTGGTGCTGGTTAGTAAAAAAAGACGCAGATGCAAAATAACATGCAGAAGTTTCGAAACAGTTTAGTAAAGCCTTTGAAGTTCAAATGTAAATTCAGTCTATTTGCATGTTATTGATCTTATTTTGAACGATTCATGCATTCACGTGATTCTTTTTTTTTTAAATTAAAATATCAGTTTCAACACACTACTAACTAACTCAACCAGGCCCCGCCCCTTTATTCTACATATTAATTATTTAAATGAGGAGGCGTTTCAGGGAGTTCAGAAACACTGACACTGATATAGAGAAGAACTCCCACTAGAGGGACTTTGCAGAGCTTTTTCATGATCAAACAACAAGCAACATTTACACACTAAAGAAAGATGAACAGGGAGAAAAGCAGAATATGTCGTCTGTAAATGTTTGACTAGCTTTAGTTTCAAAGTATCTCTTTTAGTCACGTAAACGGCCCTGACAGCGAAAGACTCGCCCTCAATCACACACATCTCAGAGATCAGACACTCTCACCGTCTGCGCTCATGTTACCTGTCACACTCAAAGGATTCTGGGAAGTATGTGTCAGCCTGTTTGATCGTGTGTCTGTTCTCGCCTAAACCTCTTATTAAAGGGTTTGGACCAAAAAAAAACCATGTTTATAGAATAGCACTGATTAATATTTTTACACTGTTTTAATGAAATAGCAGGCGACGATTATGTATTGATATATTGGTGCATTCTTGCAGATGTTCATTAATTATTTAATAATATTTGTCAATTATCATCAAATGATAGAAAATAATGTTGTTTTCAGATATTTTTAGTGCATTTTAAGAAAATATTGTGAAATAAATTCAGTAATTCATGTGTCTCATATTTTTAAAAAAATAATTTTTATTATACACCACTGAATTTTTGAGTAAATATTGTATTAAATTTAAGGATACAGCTAGGTTTTTATATATAATATTGTGAAAATATTAACATTTTTAATTAAAATAATATTGTTAAAATATACAAATTAAAAAGCAATATATATAAACAATATATATTTAAATTTGTATAACAATAATTATATATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGTTTTATAATATATATATTATATATTTAATTTATAATTCAATGTATATTTTTTCTTTCCAACTTTTCTATATATTTTTGTATATTTTGTATATTTATATATTTATAATATAAATATTTTGTATATTTTTCAATATGAAAACTATTGAGCTTCTAATTTTCACAAAGTTGTGAAAAACTTTTTCCAAATGATCCAGAAACCGCTGCACCTGGAGACAACGAGAGCTCCGACTGAACAGCGTGTCGCGGTGTTGATTTAAATCATTCATCAATCAAGCATGGATAGATCCGCTGTGAGTCGAGAAGTCGCATGACTGGCCCATTAACTCCAACTGCGCTCCATGAAAAGACAGAGCCGCCATGTTGGATCTGCCATGAATGGAGGCGTTTCTGGGTAAAAGAGGCCGGTGGACGCCGCGGGCTGCTTCCCTGCGATGCCCTCGGCGGTGCCAGTGGGCACAGTATGCCAATCCGGCCTAAAGGACAAGAGCTCGTTCTCGTCGAATGGAGGGAGTTACTATTGAAATGTGACTCCCCTTCCCCCTTGAATGCATCAATCTCAGGGCAGCATGAGACCTCAGGGCAAAATACAGTACTGATATACAGCTGGAGTGAATCCGGGACCAGAGGACCGTTAACGCTGGAAAAGGGATCCACAATGAACATTCATTTGCGTTTTCTTCAGCAACGATCGGATGGTACGTCCCACTTTCTATTGTTGGAGCCACAGAGCCGAAGAACTCGCTGCAACAAACCGCGCCCCGCCCACAGCGGGATCCCTGAGCTGATTGGCCAATGTCGCACACAGACCACACCCATCAAGTCTAACTAGTAATTGCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_08425310_08441838.mRNA True 2044 mRNA 0.36 4 8423797 8441847

Neighbor

gene id symbol gene type direction distance location
CI01000029_08367350_08368348 GPR6 coding upstream 55283 8366344 ~ 8368514 (+)
CI01000029_08346604_08357224 NA coding upstream 66164 8346401 ~ 8357633 (+)
CI01000029_08318488_08338631 NA coding upstream 84438 8318488 ~ 8339359 (+)
CI01000029_08288440_08301175 NA coding upstream 122440 8288440 ~ 8301357 (+)
CI01000029_08198433_08203489 NA coding upstream 220259 8198365 ~ 8203538 (+)
CI01000029_08443106_08447917 CDC40 coding downstream 1111 8442958 ~ 8447917 (+)
CI01000029_08484998_08502958 NA coding downstream 43105 8484952 ~ 8503169 (+)
CI01000029_08506379_08516187 NA coding downstream 64532 8506379 ~ 8516305 (+)
CI01000029_08533907_08555317 PAK6 coding downstream 92060 8533907 ~ 8555969 (+)
CI01000029_08558693_08564749 MYH6, MYH7, MYH6.S coding downstream 116416 8558263 ~ 8564996 (+)
G155769 NA non-coding upstream 39456 8382868 ~ 8384341 (+)
G155758 NA non-coding upstream 42013 8381585 ~ 8381784 (+)
G155757 NA non-coding upstream 45507 8378071 ~ 8378290 (+)
G155753 NA non-coding upstream 49468 8374034 ~ 8374329 (+)
G155720 NA non-coding upstream 175084 8248489 ~ 8248713 (+)
G155809 NA non-coding downstream 293 8442140 ~ 8442351 (+)
G155845 NA non-coding downstream 124460 8566307 ~ 8567447 (+)
G155848 NA non-coding downstream 125768 8567615 ~ 8567913 (+)
G155851 NA non-coding downstream 147539 8589386 ~ 8593261 (+)
G155855 NA non-coding downstream 151700 8593547 ~ 8593956 (+)
G155627 NA other upstream 491620 7931480 ~ 7932177 (+)
G155522 NA other upstream 785963 7634833 ~ 7637834 (+)
CI01000029_06906861_06907157 NA other upstream 1516365 6905834 ~ 6908633 (+)
G155083 NA other upstream 1933503 6431535 ~ 6490294 (+)
G155079 NA other upstream 2135399 6282685 ~ 6288398 (+)
G156007 NA other downstream 522971 8964818 ~ 9064541 (+)

Expression


Co-expression Network