CI01000029_08506379_08516187


Basic Information

Item Value
gene id CI01000029_08506379_08516187
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 8506379 ~ 8516305 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_08506379_08516187.mRNA
CGCTCCAAGCGTCCCAGCGGAGACCGCGGTCCCGTCCCAGAGGAGCCAGACTCCAGAGGAACACGTTTCCCAGCAGGAGGGTCAAATGCAGATCATGTACTGCAAAGATCAGGTGTACCAGGGAGACAAGGAGTTCAGCCTTGAAGAGCTCCGTGCGCAGCGCTACTACAGAGCCCTGAGCGAAAAGTCCTCACACCTCAGAAAAGTAAAGCAGGACCTGCAGCTTCAGATCGAGCAGAGACTCATTCGGCAGAGAATCAGCAGCACCGCAGCGCAGCAGCAGATCGTTCTCGAGGAGGCCAGTTCTTCCTCCCAGATGTCTACAAGTTCATGTGAATCTGCCGCCACTGCGGTGAAATCAGCTCCATTCATGATATACAGCGAGCAGGAAGAAGGTCGTGTGGTTCAGAGATCATTTTCGGCGAACCGTGTATCTCTGAAGCTGCCCACCTTGAGTCTGAAAGCGCCGAAGTCAAGAGCCGAGCTCTCCGCTGACAAAGACGCGTCCATCTCTCGCTCTGAGGAGGCCATCATCAACGGCCACTGGAATAAGACTCTGTGCCGGAGTCCAAATGACACGTGTGAATTCGCTCGTGCGGCTCAGCTCGCTTCAACTCCGTTCGGAGGAGTCGAGAGGCCAAAAGTGTCCGAAGCAGGACTGACGGAGAATCTGAGCAGAAATGCTCCAGAAGCCACTAAAGCGCCGAGCTCTGATACGAGTCCTGAGGAGAAAAAGCTCAGTCCTATCCTAGAGATCAGTCAGGAGTGTGGCAGCACTTCCTTCGCTACCTTTTCCCAGGATCCCATGAAATGCTTTAATGACACTGAGATCAGCCGATCTGTGGAGAGAGCAGAGACTGTGCTGGAGAATGTCACTGAATCCGAGGACGTCTGCAGTCCGGGCGTAAGATCCAGGCTGTTCCAGCAAGCAGACGTGACGTCGTTTCCAAACTTTCACCGTAAAACTGGACTTCTGCCTGACACCAGCAGCAACTTAAATCTCGGTACATATGGAGAGACGTTGTTTTACTGCGGTAAGTTGGGGACGCTGAAGGACTTCACCTTGTACTCGTCCAGCACCGCTGCTGTCCTTCTGAAGCTGGACTCTTCCTCAGTGCCGTGGGATTTCTTCATCAGCTCGCAGCTCAGAGCTCGACTGTCACATGATCAACAGGATCATCTCGCCCAGATCTCCTGCTATGTGTATGAGAACGGCTGCATGACTCTCTGGAGGATTCCTCGTGGAGACACCATTGAGGATCTTCTCTCTGAACCCATTGCTAGACAGGATGTTTCACTTATAGTCCTTCAGTTACTAGAGTTGGTGAAGCGGTTTCATTCCTGTCAGGTGGTTCATGGAGGCCTGAAGCCAGAATCACTGTACTTTTACCTCAGTGGCATTACAGCACTAGATTTCTCAAACGCAGTGGATCTACAGCTCCAGAGTGACGTGAAAACGGCACAAGATCTTCCGTCTGCACAGGACTACATACAACGGGGTCTTCTGTCACCTTCTGCCTCACCTTATCAGGTTGATCTGATTGGCCTTGCAGAAATCGTGCACATGCTGCTGTTTAATCGACCAATGAAAGTGACGCTGGAGAATTCGGCCTGGAGTTTGGATGAATGTTCTGGATCTCACCACAGCGCTCCTGTAAATTCCTTATGGAAGGACTTTTTCCACATGATTTTGAATCCAGAGCAAACGTCTTCAAAGCTGGTTTTGTCCGATCTCATCAGTAATGTGAGCAACAGCTTATGAATGCCTGATTTTAAGTCAGGTTACACTATTTTGTTATAAAATAATGTTATGTTCTTTTCACTCCATGTAAAACAGTGATAATGGAATTAATGTTATATATTGTTGTTTATACACGTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_08506379_08516187.mRNA True 1880 mRNA 0.50 13 8506379 8516305

Neighbor

gene id symbol gene type direction distance location
CI01000029_08484998_08502958 NA coding upstream 3210 8484952 ~ 8503169 (+)
CI01000029_08443106_08447917 CDC40 coding upstream 58462 8442958 ~ 8447917 (+)
CI01000029_08425310_08441838 NA coding upstream 64532 8423797 ~ 8441847 (+)
CI01000029_08367350_08368348 GPR6 coding upstream 137865 8366344 ~ 8368514 (+)
CI01000029_08346604_08357224 NA coding upstream 148746 8346401 ~ 8357633 (+)
CI01000029_08533907_08555317 PAK6 coding downstream 17602 8533907 ~ 8555969 (+)
CI01000029_08558693_08564749 MYH6, MYH7, MYH6.S coding downstream 41958 8558263 ~ 8564996 (+)
CI01000029_08578097_08583564 SLC25A47A coding downstream 61510 8577815 ~ 8583973 (+)
CI01000029_08654610_08655443 NA coding downstream 136277 8652582 ~ 8656550 (+)
CI01000029_08743604_08749941 WDR20 coding downstream 224429 8740734 ~ 8750337 (+)
G155809 NA non-coding upstream 64028 8442140 ~ 8442351 (+)
G155769 NA non-coding upstream 122038 8382868 ~ 8384341 (+)
G155758 NA non-coding upstream 124595 8381585 ~ 8381784 (+)
G155757 NA non-coding upstream 128089 8378071 ~ 8378290 (+)
G155753 NA non-coding upstream 132050 8374034 ~ 8374329 (+)
G155845 NA non-coding downstream 50002 8566307 ~ 8567447 (+)
G155848 NA non-coding downstream 51310 8567615 ~ 8567913 (+)
G155851 NA non-coding downstream 73081 8589386 ~ 8593261 (+)
G155855 NA non-coding downstream 77242 8593547 ~ 8593956 (+)
G155853 NA non-coding downstream 78257 8594562 ~ 8595141 (+)
G155627 NA other upstream 574202 7931480 ~ 7932177 (+)
G155522 NA other upstream 868545 7634833 ~ 7637834 (+)
CI01000029_06906861_06907157 NA other upstream 1598947 6905834 ~ 6908633 (+)
G155083 NA other upstream 2016085 6431535 ~ 6490294 (+)
G155079 NA other upstream 2217981 6282685 ~ 6288398 (+)
G156007 NA other downstream 448513 8964818 ~ 9064541 (+)

Expression


Co-expression Network